Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1836 ATGAAACCTTTGGATATTCTCATTCCTCAAGATACAGCAATGAAAAATCAGAAAGTTACTAAGAAGTTAAAAAGATGGAGAGGTGTTTACCTTTTTATCTTAATAGTGGGTGTTCTTGCTCTTCTCCTTTATGGTGCTGCCTTCTCCAGATTCTTCTCCTTCAAATCATTTCTCGGCACTGAATCCTTTTACTCCCATTTGAGTCCTGATAGCACAAATGGGAATCAACATAAAGGGATAATAACAGTGCAAATTGTGATTCAGAGAATTCAAAAGGAACTTGACAAACTGAGGGAAACAGAACAGGATCAATCATCATCATCATCACAATCTGCACTGGAGCAAGGTGCTTTTCTTGCTGACATATTAGGGCTTCTTGAGTCAGTAGTGGAATCTCACCCACTAAGTGAAGGGAATGATCAGAAAAATGGAAGCTACAACACCTTTCTTCACCCTCCGATGAAAGAAGAGAAACAATCTGATGAACCTGGTAATTACTTTCTGCGCGAAGAAATTCGCAAGTATGTGAGGATCAAGCCTAACAGATTGGGAAAACAGAACTTCATGGGGGCAAATGCAACTTTCACCAGCATAGGACACGCGTGCTTTGCGATGAAGGAAGAGCTAGAAGAGTACATGGAGTATGATGTTGGAGAATTCTGCAATGATGATTGGAAGCTAGCTCAAAAGCTCATGGTTCATGGTTGTGATCCTCTACCAAGGAGAAGGTGTTTTTCAAGAGGCCCCAAATTCTACAGCCAACCATTCCCTATTGAAGATTCCATGTGGAAACTCCCTGATGATAGAAATGTTAGATGGGGTAATTACAGGTGCAAGAGCTTTGCTTGTCTTGCAAGCAACAACAACACAAATAAGGGATTTTTCAAGTGTTCAGATTGCTTCAATCTCACTCATCATGAGATGCCAAGATGGGTTAGATTAGAAGGTGAATATTCAAATGAGAGTGCTGACTTTCTTATTAATGATGTTATTGGAATTAAGCAAGGAGAGATCAGAATTGGATTGGATTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGATTTCAATGTGACTATAGTTTCAGCAACTATCAATTTTGGAGCACCCTTCAGTGAAATGATAGCACTTAGAGGACTAGTTCCTCTCTACTTGACTATAAACCAAAGGCTTCCATTTTTCGATAGCACCTTGGATTTGATTCACACAACAAGGTTTCTTGATGGGTGGATTGATTTAGTGCTCCTGGATTTTGTGTTGTATGATTGGGATAGAGTTTTAAGGCCAGGGGGGTTGTTGTGGATTGATAGCTTTTTCTGCTTGAAAGAGGATTTGTATGATTACTTGCAGGCCTTCGAAATGCTGAGATATAAGAAACACAAATGGGGTGTTGCTCCAAAGCTTGATAAGGATGATAAGGAGGTGTTCTTTTCTGCTGTTTTAGAGAAACCTCCTAGGCCATTCCGGTGA 1476 0.4031 MKPLDILIPQDTAMKNQKVTKKLKRWRGVYLFILIVGVLALLLYGAAFSRFFSFKSFLGTESFYSHLSPDSTNGNQHKGIITVQIVIQRIQKELDKLRETEQDQSSSSSQSALEQGAFLADILGLLESVVESHPLSEGNDQKNGSYNTFLHPPMKEEKQSDEPGNYFLREEIRKYVRIKPNRLGKQNFMGANATFTSIGHACFAMKEELEEYMEYDVGEFCNDDWKLAQKLMVHGCDPLPRRRCFSRGPKFYSQPFPIEDSMWKLPDDRNVRWGNYRCKSFACLASNNNTNKGFFKCSDCFNLTHHEMPRWVRLEGEYSNESADFLINDVIGIKQGEIRIGLDFSVGTGTFAARMRDFNVTIVSATINFGAPFSEMIALRGLVPLYLTINQRLPFFDSTLDLIHTTRFLDGWIDLVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDLYDYLQAFEMLRYKKHKWGVAPKLDKDDKEVFFSAVLEKPPRPFR* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1836 491 MobiDBLite consensus disorder prediction 134 162 - -
Lja3g1836 491 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 18 490 - -
Lja3g1836 491 Coils Coil 80 107 - -
Lja3g1836 491 Gene3D Vaccinia Virus protein VP39 314 477 IPR029063 -
Lja3g1836 491 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 18 490 - -
Lja3g1836 491 MobiDBLite consensus disorder prediction 134 148 - -
Lja3g1836 491 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 332 439 IPR004159 GO:0008168
Lja3g1836 491 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 313 466 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1836 Lja-Chr3 20861021 20862496 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1836 - - lja:Lj0g3v0200579.1 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1836 3 20861021 20862496 Lja3g1836 3 20861021 20862496 ECH