Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1830 ATGGCGCTTCTTGTACACTCACCGGAAGTGTACGTTGTCGCTCAAAGTGCGTACAAACCTAACCCTAAGCTGACCAAACCCCACAGCTTCAAACCCTACAAGGCAATCGGAACCAAGCGCGGGGTGAAGATTCCTTGCGCAGTCAAAGATTTTTCGGTTCTGGAAGATTTGGGGTTGGATCAGAACGTGAATTCGTACGGTCAATTCTCGGTTCCGTTGGAGCAAGGTTCGAGGCCGAGCAAAGAGGAAGCGGAGGAAAAGCAGAACTATTATGTCAATCTTGGATATGCTATTCGAACTCTCAGGGAGGAGTTTCCTGATCTCTTCTACAAGGAGCTTAGCTTTGATATCTACAGGGATGATATTGTATTGAAGGATCCTTTGAATACATTCATTGGTATTGAGAATTACAAATCGGTCTTTTGGGCACTACGATTTCATGGCAGGTTGTTTTTCAAAGCTTTGTGGATAGACATCAGTAGTATGTCGCAGCCTGTTGAGAACGTCATTATGGTTCGCTGGACTGTTCATGGGATCCCTCGAGTTCCATGGGAGAGTCGTGGTAGGTTTGATGGAACCTCTGAGTATAAACTTGACAAGCAAGGCAAGATTTATGAGCATCGGGTTGACAACATTGCTCTGAATTCACCTCATTCTAGGTTTAAAGTGCTGGGTGTGGAAGAATTAATTAAATCTCTTGGCTGCCCCTCGACCCCAAGACCAACTTACTTTGAAATATCTTCATCTTCTCAGAGAACGTAA 762 0.4475 MALLVHSPEVYVVAQSAYKPNPKLTKPHSFKPYKAIGTKRGVKIPCAVKDFSVLEDLGLDQNVNSYGQFSVPLEQGSRPSKEEAEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDIYRDDIVLKDPLNTFIGIENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVHGIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPSTPRPTYFEISSSSQRT* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1830 253 SUPERFAMILY NTF2-like 115 209 IPR032710 -
Lja3g1830 253 PANTHER RIKEN CDNA 2310061I04 GENE 41 252 IPR018790 -
Lja3g1830 253 PANTHER - 41 252 - -
Lja3g1830 253 Pfam Uncharacterized conserved protein (DUF2358) 97 207 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1830 Lja-Chr3 20795740 20798329 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1830 - - gmx:100792423 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1830 3 20795740 20798329 Lja3g1830 3 20795740 20798329 ECH