Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1828 ATGGGTTCTTTGGAATCCGGGATCCCATTGAAGAAGGGGAGCTTGTTTGGTGGTTCTCAATCCGGTAGAAAAGAGAAGCAGCACCCGTTTTCTCAGAGGTTCAGATCGAGCTTCTCGAGGTTAATCTTCAAGAAGCTAGATTATGTGCAATGGATTTGCACGGTGGTTGTGTTTCTCTGCTTGGTTGTTGTCTTTCAAATGTTCCTGCCTGGTTCGGTTGTTGAAAACCAGGAGGACTCGTTGAGAGCTGTGGAGGTGCGTTCTGGGAACTTGTGGCATAATGGGGATATGGAGAATTTTGTCTTGGACATTGGGGAGGAGGCTGTTTTTCTGACTACGATTTCGGAGAATTTCAGGAGAGGTGGTGGTAGGGATGTGAATCTGTTCAACCACACGGCGAAACATTTCGGATACAGGAAGCCTCAGTTGGCACTGGTGTTTGGAGAACTATTGGTTGATTCCCAACAACTGTTGATGGTAACAATTGCAGCTGCTTTATTAGATATTGGTTATAAAATTCAGGTCTTTTCACTTGTAGATGGACCAGGGCGTAATGTTTGGAAAAGTTTAAGGGTTCCCATCAATGTCACTCAAACTTGTTACAAACGAAACAACACTATAGACTGGCTAAACTATGATGGTATAATTGTGAGCTCTCATGAAGCCAGAGGTGCCTTTTCTTGTTTTTTGCAGGAACCTTTCAAGTCTGTACCTCTTATATGGGTCATTCATGAAAAAGCACTTGGTTATCGTTCAAGACAATATTCTACCACTGGGCAAACTGAACTTTTGAATGATTGGAGAAGAGCTTTTGATCGTTCAACAGTTGTTGTCTTCCCAAACTATGCTTTGCCGATGATTTACTCCACATTTGATGCTGGAAATTTTTGCGTCATTCCTGGTTACCCTGCTGAAGCATTAGAAGCAGATGCATTTATGGCCTTGCATAAAGATAATTTGCGGATCAGTATGGGCTATGGCCCGGAAGATGTGATCATCGCAATTGTGGGCAGTCCATTTTTGTACAAGAGCATGTGGTTGGGGCATGCTATTGTTTTGCGGGCTTTGTCACCACTTCTGGCTGACTTCTCTTTAAGCAAAGATAATTCTAGTGCACAACTACGGATCATTGTTCATAGTGGGGAATTAACAAATAACTACAGTCTGGCTCTTGAGACCATGGCACGTAGCTTGAAATACCCAAAAGGCATTATAGAGCATATAGCAGGAGATTTGAATGCGGATTCTGTTCTTGGCACTGCGGATGTTGTGATATATGGATCCTTCCTTGAAGAGAAATCTTTCCCAGAGATTCTGGTTAAAGCCATGTGCTTCGAGAAGCCAATTATTGCTCCTGATATTTCCATGATCAGAAAATATGTTGACGACAGGGTGAATGGCTATCTTTTCCCTAAGAATAATATTAAAGTTCTTCGACAAATAATGTTAGAGGTGATCTCAAAGGGGAAAATATCACCTCTGGCTCGTAACATTGCCTCAGTAGGGAGAAGTACTGCAAAGAACCTTATGGTTTCAGAAGCAATTGATGGATATGCAGCTTTACTTAGGAATATTCTCAGGCTTCCATCAGAGGTTACTCCTCCTAAGGCTGTTTCAGAAATATCCCCCGGTGTTAAAGGGCAATGGCAGTGGCATTTGTTTGAAGCAGTTCCAAGTTTGACATATCAAAATAGGACATTTAGAAGTAACGCGTTTTTAGATGAATATGAAAATCGGTGGAATCATTCTCAAAAAAACAGATCCACTACTATGGTTTCTGCTAATGATTCATTTGTGTATAGCATATGGGAAGAAGAAAGGAACATTCAGATGGCTATTGCTAAAAAAAGGAGAGAGGATGAAGAGTTGAAGGATAGAACAGAGCAGTCACATGGAACCTGGGAAGAAGTATATCGAAATGCTAAGAAAGCTGATAGGTTGAAGAACGATTTGCATGAAAGGGATGAAGGTGAGCTTGAGCGGACTGGACAACCACTATGCATTTATGAACCGTACATTGGGGAAGGATCTTGGCCTTTTCTTCATCATAAGCCTCTTTATCGTGGAGTTTCCCTATCCAGTAAAGGTCGAAGGCCAGGGAGAGATGATTTCGATGCACCTTCTCGTCTTCCACTGCTTAACAGTGCTTACTATCGGGACATACTTGGTGAATATGGAGCTTTCTTTGCCATCGCGAACAGGGTTGATCGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAGCACAAAAGGCGTCTTTGTCCAGAACTGCTGAAAATGCATTATTAGATGCCATCCAAACCAAAAGGCATGGAGATGCACTATATTTCTGGGTGCGCATGGATATGGATCAGCGAAACCCTTCGCAGATGAACTTTTGGTCATTTTGCGATGCCATAAACGCAGGAGGTTGCCAGTTTGCTTTCTCCGAAGCGATGAAGAAAATGTATGGATTGAAAAATGATACGGTTTCTTTTCCGCCCATGCCTATAGATGGAGACACTTGGTCTGTCATGCTGAGCTGGGCTCTTCCTACAAGATCTTTCTTAGAGTTTGTGATGTTTTCCAGAATGTTTGTAGATGCATTGGATGCGCAGATGTACAATGAACACCATTCAACTGGACGGTGCCCTTTGAGTTTGTCAACGGATAAGCATTGCTATTCGCGGGTTCTCGAGCTTCTTGTAAATGTATGGGCGTACCACAGCGCAAGGAGAATGGTGTTTGTGAACCCGGAAACCGGTCTAATGCAGGAACAACACAAGTTCAAGAGCCGTAGAGGTCAAATGTGGATCCAATGGTTCTCATACAACACACTTAAGAGCATGGATGAGGACTTGGCAGAGCTATCAGATTCAGAAGATCCTAACAGGCATTGGTTGTGGCCATCAACCGGTGAAGTCTTCTGGCAAGGTTTGTATGAGAGGGAAAGAAATTTAAGGCAGAAGGAAAAGGAGAAAAGGAAGCAAAAGAGTATGGAAAAACTATATAGAATGAGGAAACGTCATCGCCAGCAAGTTATAGGGAAATATGTTAAGCCCCCTCCAGAAGAGGAAAGCTCTAACTCATCTTCACTTGCAGTAAATGCATCATGA 3108 0.4266 MGSLESGIPLKKGSLFGGSQSGRKEKQHPFSQRFRSSFSRLIFKKLDYVQWICTVVVFLCLVVVFQMFLPGSVVENQEDSLRAVEVRSGNLWHNGDMENFVLDIGEEAVFLTTISENFRRGGGRDVNLFNHTAKHFGYRKPQLALVFGELLVDSQQLLMVTIAAALLDIGYKIQVFSLVDGPGRNVWKSLRVPINVTQTCYKRNNTIDWLNYDGIIVSSHEARGAFSCFLQEPFKSVPLIWVIHEKALGYRSRQYSTTGQTELLNDWRRAFDRSTVVVFPNYALPMIYSTFDAGNFCVIPGYPAEALEADAFMALHKDNLRISMGYGPEDVIIAIVGSPFLYKSMWLGHAIVLRALSPLLADFSLSKDNSSAQLRIIVHSGELTNNYSLALETMARSLKYPKGIIEHIAGDLNADSVLGTADVVIYGSFLEEKSFPEILVKAMCFEKPIIAPDISMIRKYVDDRVNGYLFPKNNIKVLRQIMLEVISKGKISPLARNIASVGRSTAKNLMVSEAIDGYAALLRNILRLPSEVTPPKAVSEISPGVKGQWQWHLFEAVPSLTYQNRTFRSNAFLDEYENRWNHSQKNRSTTMVSANDSFVYSIWEEERNIQMAIAKKRREDEELKDRTEQSHGTWEEVYRNAKKADRLKNDLHERDEGELERTGQPLCIYEPYIGEGSWPFLHHKPLYRGVSLSSKGRRPGRDDFDAPSRLPLLNSAYYRDILGEYGAFFAIANRVDRLHKNAWIGFQSWRATAQKASLSRTAENALLDAIQTKRHGDALYFWVRMDMDQRNPSQMNFWSFCDAINAGGCQFAFSEAMKKMYGLKNDTVSFPPMPIDGDTWSVMLSWALPTRSFLEFVMFSRMFVDALDAQMYNEHHSTGRCPLSLSTDKHCYSRVLELLVNVWAYHSARRMVFVNPETGLMQEQHKFKSRRGQMWIQWFSYNTLKSMDEDLAELSDSEDPNRHWLWPSTGEVFWQGLYERERNLRQKEKEKRKQKSMEKLYRMRKRHRQQVIGKYVKPPPEEESSNSSSLAVNAS* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1828 1035 MobiDBLite consensus disorder prediction 998 1012 - -
Lja3g1828 1035 MobiDBLite consensus disorder prediction 1021 1035 - -
Lja3g1828 1035 Gene3D Glycogen Phosphorylase B; 308 509 - -
Lja3g1828 1035 MobiDBLite consensus disorder prediction 985 1035 - -
Lja3g1828 1035 CDD GT4_PimA-like 159 523 - -
Lja3g1828 1035 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g1828 1035 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 155 523 - -
Lja3g1828 1035 Pfam Glycosyl transferases group 1 386 489 IPR001296 GO:0016757
Lja3g1828 1035 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1027 - -
Lja3g1828 1035 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1828 Lja-Chr3 20766156 20775873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1828 - - gmx:100806723 1668.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1828 3 20766156 20775873 Lja3g1828 3 20766156 20775873 ECH