Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1821 ATGATGAAGAATTCGAATGCTCTGCTACCTGATCAGCCAATCAATCACCATGAAAGTTCGAAATCGGAGTTCGTTGACCCTGCCTTGGTGATGGAATCTGAGCGGTCTCATGGTGGCACTTCTTCTGAATCCGATTTTGGCTTCGCCTTCAATGACATCAATTTCTCTGACAGGCTTCTCCGAATTGAGGTCATCAACGAAAACCCGGGGGTCACCACCGCCAATTCAGATGGTGTCACCACCACCTGGGCTCGCCACAGCAAGAGGAGACGCGAAAATGTTTCGGATCTTATTGATTTGCCTGATGAAAACCACGTTTTGAACGTGAACCAACCTGATACCGATGATGATGTGGCCTATGGAAATCAAGATAAGGAGACCTATGTAGTGTTGGAAGAATCCCCTTCTGGTGATGAAGCTGCAAACATCAATGATTCAAACAGGAGCAAAGATTGCTCTCCAGCTACAGTTGTCAGAGTTAAAACACTGCATATAAGTTCTCCTATCCTGGCTTCTAAAAGCCCTTTCTTCTATAAGCTTTTCTCGAATGGGATGAGGGAGTCAAAGGAGAGACATGTCACCCTCAGGATTAATGCTTCTGAAGAAGATGCTCTAATGGACCTGCTGAATTTTATGTACAGTAATACCTTGAAGGCTACTGCACCATCAGCTTTGCTGGATGTGCTTATGGCTGCTGATAAATTTGAAGTTGCTTCATGCATGAGACACTGTAGCCGGTTATTGCGAAATTTGCCCATGACACCTGAGTCTGCATTACTTTACCTGGACCTTCCTCATACTATCTTAATGGCCGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTTGCTGACCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTTATGGCCTTGCCTCTATCTGGAATAGAGGCAATTTTGGCCAGTGATGATCTCCAGGTTGCATCAGAAGATATTGTATTTGACTTTGTATTGAAGTGGGCTAAACAACATTACAACAGACTGGAAGAGAGGCGAGAAGTCTTGGCAACACGGCTTGCTCCTTTAATTCGCTTCCCCTGCATGAGCTGCCGAAAGCTTAAGAAGGTCTTAAACTGTAATGACTTTCAACAAGAGGGTGCATGCAATAAGCTTGTACTAGAAGCCGTATTTTACAAGGCGGAAACTCCACATCGTCAACGGTTGCTTGCAGCAGAAGAGACTTCTTCCTTGAACCGTTGTTTTGTGGAGAGAGCATATAAGTATCGTCCTGTTAAGGTGGTAGATTTTGTACTTCCCCAGCCGCAGTGTGTGGTGTACATGGATCTGAAGCGGGAGGAGTGTGCCTCTCTGTTCCCATCTGGCCGGATGTATTCTCAGGCATTCCATTTGGGTGAGCAAGGTTTTTTCCTTTCAGCACATTGCAACATGGACCAACAAAACTCTTTCCATTGCTTTGGGATGTTTTTGGGAATGCAGGATAAGGGCTCAGAAAGCTTTGCTCTGGACTATGAATTTGCTGCAAGATGTAGCCCAACAAATGAGTTTGTTAGCAAGTACAGAGGCAATTACACATTCACCGGAGGGAAGGCTGTTGGGTATAGAAACTTGTTTGGAATTCCATGGACTTCGTTCATTGGTGAGGATAGCATTTTCTTCATTAAGGATGTTCTCTACCTTAGAGCTGAGCTCACCATCAGACAGCCTTGA 1701 0.4497 MMKNSNALLPDQPINHHESSKSEFVDPALVMESERSHGGTSSESDFGFAFNDINFSDRLLRIEVINENPGVTTANSDGVTTTWARHSKRRRENVSDLIDLPDENHVLNVNQPDTDDDVAYGNQDKETYVVLEESPSGDEAANINDSNRSKDCSPATVVRVKTLHISSPILASKSPFFYKLFSNGMRESKERHVTLRINASEEDALMDLLNFMYSNTLKATAPSALLDVLMAADKFEVASCMRHCSRLLRNLPMTPESALLYLDLPHTILMADAVQPLTDAAKQYLADRYKDITKFQEEVMALPLSGIEAILASDDLQVASEDIVFDFVLKWAKQHYNRLEERREVLATRLAPLIRFPCMSCRKLKKVLNCNDFQQEGACNKLVLEAVFYKAETPHRQRLLAAEETSSLNRCFVERAYKYRPVKVVDFVLPQPQCVVYMDLKREECASLFPSGRMYSQAFHLGEQGFFLSAHCNMDQQNSFHCFGMFLGMQDKGSESFALDYEFAARCSPTNEFVSKYRGNYTFTGGKAVGYRNLFGIPWTSFIGEDSIFFIKDVLYLRAELTIRQP* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1821 566 MobiDBLite consensus disorder prediction 1 15 - -
Lja3g1821 566 PANTHER OS02G0260700 PROTEIN 22 565 IPR045890 -
Lja3g1821 566 SUPERFAMILY POZ domain 161 249 IPR011333 -
Lja3g1821 566 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g1821 566 Pfam BTB And C-terminal Kelch 275 368 IPR011705 -
Lja3g1821 566 SMART BTB_4 152 252 IPR000210 GO:0005515
Lja3g1821 566 Gene3D - 283 391 - -
Lja3g1821 566 SMART BACK_2 267 369 IPR011705 -
Lja3g1821 566 Pfam BTB/POZ domain 157 249 IPR000210 GO:0005515
Lja3g1821 566 Gene3D Potassium Channel Kv1.1; Chain A 141 272 IPR011333 -
Lja3g1821 566 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 22 565 - -
Lja3g1821 566 ProSiteProfiles BTB domain profile. 152 221 IPR000210 GO:0005515
Lja3g1821 566 CDD BTB_POZ_ZBTB_KLHL-like 157 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1821 Lja-Chr3 20597001 20600377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1821 - - gmx:100781329 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1821 3 20597001 20600377 Lja3g1821 3 20597001 20600377 ECH