Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1818 ATGGCAGCAGCGGCAGCTTCCACGGTGCTACTCCCTCATCGGTTTCCCACCACCACCAACATTACTCGTTGCTCTGCTTTACCTTATCTTCCTCCTCGTGTCTCCACCACCACCACCACCACCACTTTGTTCTCACCTTCCCTTAAACACTTTTCAGAGTCCCGAAAACCTTCTCTGCTTCAGACAAGAGCTTCTTCAGATGAGACATCTTCAGTAGATACTAATGAGTTGATCTCGGATTTGAAGGAAAAGTGGGATGCTGTTGAAAACAAGTCCACTGTAATTATCTATGGTGGTGGGGCTTTAGTTGCTGTTTGGCTATCGTCAATTCTCGTGGGTGCCATCAACTCAGTTCCATTGCTTCCCAAGATTATGGAGCTGGTTGGGCTAGGGTACACTGGATGGTTTGTCTACCGATACCTTCTGTTTAAGTCTAGCAGGAAGGAGCTAGCTACAGACATTGAGTCTATCAAGAAGAAAATTGCTGGAACTGAATAG 498 0.4659 MAAAAASTVLLPHRFPTTTNITRCSALPYLPPRVSTTTTTTTLFSPSLKHFSESRKPSLLQTRASSDETSSVDTNELISDLKEKWDAVENKSTVIIYGGGALVAVWLSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESIKKKIAGTE* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1818 165 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 80 163 IPR025564 -
Lja3g1818 165 Coils Coil 147 165 - -
Lja3g1818 165 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 4 165 - -
Lja3g1818 165 PANTHER - 4 165 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1818 Lja-Chr3 20585154 20587598 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1818 - - gmx:100305578 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1818 3 20585154 20587598 Lja3g1818 3 20585154 20587598 ECH