Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1811 ATGGAGGTTGGGTTCTTGGGTCTGGGGATAATGGGCAAGGCCATGTCAATCAACCTTCTACGCCATGGCTTCAAGGTCACTGTTTGGAACAGAACCCTCTCCAAGTGTGATGAGCTTGTGGAACATGGTGCTTCAGTTGGAGAAACTCCGGCAGCTGTAGTCAAGAAATGCAAGTATACAATTGCAATGTTATCTGATCCTGCAGCTGCTTTAGCGGTTGTGTTTGATAAAGATGGTGTTCTTGACCAAATTAAGGGAAAAGGTTATATTGACATGTCAACCGTGGACGCTGAAACATCTTTAAAGATATCTGAGGCAATCAAAGCAAAAGGTGGTAGTTTCGTTGAAGGTCCTGTTTCAGGTAGCAAGAAGCCCGCAGAAGATGGCCAGCTAGTAATACTTGCTGCTGGGGACAAGGCCTTGTATGAGGAAGCACTTCCAGCATTTGATGTACTGGGGAAGAAATCTTTCTTTCTAGGCGAGGTTGGAAATGGTGCAAAAATGAAACTTGTCGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGGCTCACACTAGCTGAAAGAAGTGGTTTGAACCCTGGAACTCTTCTTGATGTACTGGATCTTGGTGCCATAAGTAACGGCATGTTTAAGCTGAAAGGACCCGCAATGCTAAAAAACAATTACTCCCCAGCTTTTCCGCTGAAACATCAGCAGAAGGACATGAGATTGGCTCTTGCCCTTGGAGATGAAAATGCTGTATCAATGCCTGTAGCAGCTGCGGCAAATGAGGCATACAAGAAAGCCAGAAGCTTGGGGTTGGGGGACCTTGATTTTTCAGCTGTCCATGAGACTTCGAAAACTCTTGATCATTAG 867 0.451 MEVGFLGLGIMGKAMSINLLRHGFKVTVWNRTLSKCDELVEHGASVGETPAAVVKKCKYTIAMLSDPAAALAVVFDKDGVLDQIKGKGYIDMSTVDAETSLKISEAIKAKGGSFVEGPVSGSKKPAEDGQLVILAAGDKALYEEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPAMLKNNYSPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAYKKARSLGLGDLDFSAVHETSKTLDH* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1811 288 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 282 - -
Lja3g1811 288 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 279 IPR029154 GO:0051287
Lja3g1811 288 PIRSF HIBADH 1 287 IPR015815 GO:0016491
Lja3g1811 288 Gene3D - 163 285 IPR013328 GO:0016491
Lja3g1811 288 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 IPR006115 GO:0050661
Lja3g1811 288 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Lja3g1811 288 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Lja3g1811 288 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 283 IPR008927 -
Lja3g1811 288 Gene3D - 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1811 Lja-Chr3 20501758 20509808 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1811 K18121 - gmx:100802847 515.768