Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1810 ATGTTTTTAAGATTACAATTGCCACCACTGGTTCCCAACATGTCGGAGAAGAACAACACAAGGAGGAAGAGTGTTAGGGTCAGCAAAAAGCCACGTCCTTCAGCGGAAACTGAAGACATAGAGGACGCAGTGTCCTTCACCAACGACGAGACCCACAAACTGAGAGTGTCTCTCTTGGCTTGGTACGACAAAAACCGCAGGGACCTTCCTTGGAGAACTACCCTAGACCCTAACAATGAAGAACAAGAGGAGGAAGAAGTGGAAAAGAGAGCTTATGGTGTGTGGGTATCTGAGATTATGCTGCAGCAAACAAGGGTTCAGACTGTTGTTGCCTATTACAACCGTTGGATGGAAAAATGGCCCACCATTCACCATCTCGCACAAGCTTCTCTTGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTATCGAAGAGCTCGTTTTCTTTTAGAGGGGGCGAAGAAAATAGTTGCAGAAGGAGGCAAAATTCCTCGGCTGGCATCTATGCTACGAAAGATTCCTGGAATAGGAGACTATACATCTGGAGCAATTGCATCTATAGCATTCAAAGAGGCAGTTCCTGTTGTTGATGGAAATGTGGTTAGGGTGATAGCGAGACTAAGGGCTATTTCTGCAAATCCAAAAGACTCAGTAATTGTTAAGAGAATTTGGAAGTTAGCAGCTCAGTTGGTGGATCCTCTTCGTCCTGGGGATTTCAATCAGGCTCTCATGGAACTTGGCGCAACTGTATGCACCCCTTTGAACCCAAGCTGTTCCTCATGCCCAGCATCAGAATTTTGTCATGCACTATCAAATTCTAAACATGATAGTACAGTAGCAGTTACAGATTATCCTGCTAAAAGTGTGAAGGTTAAACAAAGAAGTGATTTTTCTGCTGTATGTGTTGTTGAATTACTTGGAGCCCGAACATTGTTAGATGAAAACCAGACTAGCAGCAAATTTATAATTGTAAAAAGGCCTGATGAAGGATTGCTTGCTGGTCTTTGGGAGTTTCCATCTATATTGCTTGATGGAGAGACAGATCCATTGGCGAGAAGAGAAGCAACAAATTGCTTCTTAAAAGAAAATTTCAAAATTGATATAAGAAAGACTTGCAATATCGTTGTGAGAGAAGATGTTGGGGAATTTGTTCATATTTTCAGTCACATTCGCCTCAAGTTGTATGTTGAATTTCTGATGTTACAATTGAAAGGGGCAGCAGATGATTTAGTCGAGAGCCAGGGCAACGAAACTACAACTTGGAAATGTGTTGACAGCAATGCCCTATCGAGTATGGGACTAACAACCAGCGTAAGAAAGGTGTACAACATGGTTCAAAAGTTTAAGCAGAAAAGACTTCCTTCTAACCACGTGCCAACCAAAAAGAGAAGTAGAACGACCAAGAGAAAATCAGCATAG 1422 0.4255 MFLRLQLPPLVPNMSEKNNTRRKSVRVSKKPRPSAETEDIEDAVSFTNDETHKLRVSLLAWYDKNRRDLPWRTTLDPNNEEQEEEEVEKRAYGVWVSEIMLQQTRVQTVVAYYNRWMEKWPTIHHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKIVAEGGKIPRLASMLRKIPGIGDYTSGAIASIAFKEAVPVVDGNVVRVIARLRAISANPKDSVIVKRIWKLAAQLVDPLRPGDFNQALMELGATVCTPLNPSCSSCPASEFCHALSNSKHDSTVAVTDYPAKSVKVKQRSDFSAVCVVELLGARTLLDENQTSSKFIIVKRPDEGLLAGLWEFPSILLDGETDPLARREATNCFLKENFKIDIRKTCNIVVREDVGEFVHIFSHIRLKLYVEFLMLQLKGAADDLVESQGNETTTWKCVDSNALSSMGLTTSVRKVYNMVQKFKQKRLPSNHVPTKKRSRTTKRKSA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1810 473 Gene3D Hypothetical protein; domain 2 68 195 - -
Lja3g1810 473 CDD DNA_Glycosylase_C 321 446 IPR029119 -
Lja3g1810 473 Gene3D - 53 270 IPR023170 -
Lja3g1810 473 SUPERFAMILY DNA-glycosylase 54 273 IPR011257 GO:0003824|GO:0006281
Lja3g1810 473 SUPERFAMILY Nudix 320 447 IPR015797 -
Lja3g1810 473 Pfam HhH-GPD superfamily base excision DNA repair protein 96 228 IPR003265 GO:0006284
Lja3g1810 473 MobiDBLite consensus disorder prediction 454 473 - -
Lja3g1810 473 MobiDBLite consensus disorder prediction 7 41 - -
Lja3g1810 473 MobiDBLite consensus disorder prediction 455 473 - -
Lja3g1810 473 SMART endo3end 100 250 IPR003265 GO:0006284
Lja3g1810 473 CDD ENDO3c 92 248 IPR003265 GO:0006284
Lja3g1810 473 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 291 453 - -
Lja3g1810 473 Pfam NUDIX domain 320 443 IPR029119 -
Lja3g1810 473 PANTHER ADENINE DNA GLYCOSYLASE 30 470 IPR044298 GO:0006284|GO:0016798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1810 K03575 - gmx:100818278 736.102