Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1807 ATGTCTTCCTCTCTGGCTCAACCTCTTCCATGGCTATTGCTACTGCTCGCTCTCGCCGTCTTCACGGCGGAAACAGCCTCCGCGGCGGAGTTGGAGGTGGAGCCACTAGGAGGTAAAGCGCCTCAGAGAGAATTTGACTATTTCGCGTTGGCGTTGCAATGGCCTGGAACTTACTGCCAACGCACTCGCCATTGCTGTTCCAATAACGCTTGCTGCAGAGGGTCCAATGCTCCAACAATATTCACCATACATGGACTCTGGCCTGACTATAATGATGGGACCTGGCCAGCCTGTTGCACTAAATCTCGTTTCGATCCAAAAGAGATATCAACATTGACTGATGCCTTAGAGAAATATTGGCCATCATTGAGCTGTGGCTCACCATCAACCTGTCAAGGTGGAAAAGGAACATTTTGGGCTCATGAGAAGCATGGCACATGCTCATCTCCTGTATTTCGAAATGAATATGATTACTTCCTGGCGACACTGAATATCTACTTCAAATATAATGTCACAACTGTTCTAAATGAGGCTGGTTACGTTCCATCTAACACAGAAAAGTATCCCCTTGGAGGCATTGTATCTGCCATTGAGAATGCTTTCCATATGTCTCCTTTAATAATTTGCTCAAAAGGTTCTGTGGAGGAGCTTCGCCTATGCTTCTATAAGGACTTCAAGCCACGTGATTGTGCTGTTGGACAAGACATTAAAACTGACATGGTTTCAAAAGGATCATGTCCCAAGTATGTTAGCTTGCCAGAACATGCATCATTGGGAGGGCCAGGGCGTGATGGGCTCCAAAGTTGGGTGTCTGATGATGCAGCAGCATTTTAA 834 0.4652 MSSSLAQPLPWLLLLLALAVFTAETASAAELEVEPLGGKAPQREFDYFALALQWPGTYCQRTRHCCSNNACCRGSNAPTIFTIHGLWPDYNDGTWPACCTKSRFDPKEISTLTDALEKYWPSLSCGSPSTCQGGKGTFWAHEKHGTCSSPVFRNEYDYFLATLNIYFKYNVTTVLNEAGYVPSNTEKYPLGGIVSAIENAFHMSPLIICSKGSVEELRLCFYKDFKPRDCAVGQDIKTDMVSKGSCPKYVSLPEHASLGGPGRDGLQSWVSDDAAAF* 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1807 277 SUPERFAMILY Ribonuclease Rh-like 44 253 IPR036430 GO:0003723|GO:0033897
Lja3g1807 277 Gene3D - 41 257 IPR036430 GO:0003723|GO:0033897
Lja3g1807 277 PANTHER RIBONUCLEASE T2 39 258 IPR001568 GO:0003723|GO:0033897
Lja3g1807 277 Pfam Ribonuclease T2 family 45 230 IPR001568 GO:0003723|GO:0033897
Lja3g1807 277 ProSitePatterns Ribonuclease T2 family histidine active site 1. 81 88 IPR018188 GO:0003723|GO:0033897
Lja3g1807 277 CDD RNase_T2_euk 45 248 IPR033697 -
Lja3g1807 277 PANTHER RIBONUCLEASE 2-LIKE ISOFORM X1 39 258 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja3g1807 Lja-Chr3 20473441 20478428 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1807 K01166 - gmx:100789614 404.445