Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1806 ATGAAGGCATCTGTACTACTACTCTTCACAATTACTTGTCTTAGTTTATTCTCCCATGCAAAGCCAGAAGCTGACTCATGTACCTGCAATTTAAACCTCAAAGCTCCTATCCCTTTTGATACCTCCAACCTTCACTGCCTTCCGGTATGGAATGCTCAAGGTTTCATCCTCAGGTATGCTCAGACTTCTGCAAACATTTGGAGCTTCATTCTCTCAACTCCAGACACAAATTCTTACATAGCTATGGGGTTCTCGGCCAGCGGTGGCATGGTGGGTTCAAGTGCAATTGTGGGGTGGGTGGCATCTAGGGGAGGCAGTGGAGGGATAAAGCAGTATTATCTAGGTGGCCTTACACCAAACCAGGTAGTGCCTGATAAAGGCAATCTACAGGTTACAGCCAATTCAACCTTCATCAGTTTACAGTCCTCTCGTCTGTACATGGTGTTTCAGTTAGAAGCTACCGAACCTTTGTCCTGGCTAATATTTGCCACTGGATCCACCGGTATATTCCCTGCAGCACCAAGTTATGCACTAACGAAACACCTAGACAAGGTGTCCACAAGAATAGACTACTCTAAAGCCAGCCTTGGAAGTTCACAAGCGGATGGGAATTCTTCACAAGTAGATGGAAGCAGTTCAAATTCACAAGCAGACTCCTGTAACATGAAGCTAAACCTCAGTGTTCCTCTCTTGTTCGATACAACAAAGCTCAATTGCCTTCCTGTTTGGAGTGCTCAAGGATTCATCCTTAGATATTCTCAGAGCTCTCCAAACATATGGAGCTTCATCCTATCAGCCCCAAGTCCAAATTCTTATATAGCTATGGGGTTCTCTCCCAATGGAGGCATGGTGGGTGCAAGTGCCATTGTGGGATGGATCTCATCCAATGGAGCTAGTGGAGGCTTGAAGCAGTATTATCTAGCAGGGACTGCACAAAATCAGGTGGTGCCAGATAGAGGCAACTTAAAAATCCTCTCAAACTCAACCTTGATGACATCACAGTCCTCACATTTGTACATGGCCTTTCAGTTAGAAACCAACCGCCCTCTTTCGGGGCTGATTTATGCCGTCGGACCTAACAGTATCTTCCCTTCAGCACCAAGTTTTGCTTTAGCGCAGCATCAAGACAAAGTTTCCATTAAGTTGGATTATGCCGCAGGTTCAAGTGCATCAGAAAACCCCTATACAAACCTGAAAAGAAGGCATGGAATTTTGAATATCCTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGCCACTTCAAGCAATGGGATCCATTTTGGTTTTATTTCCATGCTTCTGTTCAATCATTGGGTTTTCTTCTCGGAGTAATCGGTGTAATTACTGGAATTGTCCTCCATAATCAACTCCATATTGACTTTAATCTTCACAAGACTCTTGGAATCATCATTCTCATTCTAGGTTGCCTCCAGGAATCAAAAGTGAGAAAGTATTGGAATTTTTACCATCATAACTTAGGGAGAATTCTGATCATACTAGCTATAGTTAACATTTTCTACGGAATTCATTTAGGCAAGGAAGGAAGTGGATGGAAGGTAGGTTATGGAATTCTTCGCTTGTTCATTATCCTCTGTGGTTTATCAACGACCCTAGTGACTTCTCAAGATTCATGTAGCTCTAAATTGTTGCAACTCCAGCAACCTGTTCCTTTTGATACAAGCTCACTTCTGTGCAATCCAGTTTGGGGCGATCACAGTTTCATCCTTAGATATGCTAAGGCTTCATCAGATGTTTGGAGCTTCATATTCTCATTCCCCTCAAACATAAACGCTTATGCGGCAATAGGATTCTCCAATGATGGCAGCATGGTTGGTTCTACTGCAATTGTGGGGTGGATGCCATCTCCGGGTGCAGGAGGAATGAAACAGTACTTTCTGGGTGCAAAGTCACCAGACCAGGTTACTCCTGACAAAGGAGATCTTTATATGATGAATGCATCCATAGTTCCTGCTAGTACTTCACTAGTGTACATGATCTTCCAATTGAAAACCACCCAACCTAGTTCAAAGCTAATATTTGCCATTGGACCCGATGGTGCATTTCCTAATTATCCAGGTTATGCCTTGGCCCAACATAGTGATCAGATATCCAAAGTCATAGATTATAAAACAGGTACAACAACTAGTGTAATTCCATACCTGAATCTTCGAAGAAGCCATGGGATTCTGAACATTGCAGGATGGAGCATTCTATTGATAATAGGATCCATAATTGCTCGCTACTTCAAGCACTGGGATCCCACTTGGTTTTATTTACATGCTTCCATTCAAGCACTTGCCTTTGTAGCTGCCGTAGTTGGAATTTTCATTGGACTAGCCTTATCTAGGAAACTCAAAGCTGAATCTGATGTCATTCATCACAAAAATATAGCAATTCTCATTATCATCCTAGGATTCCTCCAGGTGTTGGCCATTGTTTTACGACCAGGATTGGAATCAAAGATACGGAAGTATTGGAATTGGTACCATCATAACATAGGGAGAATTTTGCTTTGCTTTGCAGTGGGTAATAGCTTTTATGGACTCCATTTAGGAGGAGAAGGGTCTAAGTGGTTTCTTGCTTATGGAGTTTCCATTGCTGCCTTAGTTCTTATCGCTGTCATTTTGGAGATAAGAATGTGGATTGTTGCAAGAAAAGAGAGTCAGTCCAGAAAGACAACATCGTTTCCTCAATCCAGTACAGAGTTAGCTTACTATTAA 2730 0.426 MKASVLLLFTITCLSLFSHAKPEADSCTCNLNLKAPIPFDTSNLHCLPVWNAQGFILRYAQTSANIWSFILSTPDTNSYIAMGFSASGGMVGSSAIVGWVASRGGSGGIKQYYLGGLTPNQVVPDKGNLQVTANSTFISLQSSRLYMVFQLEATEPLSWLIFATGSTGIFPAAPSYALTKHLDKVSTRIDYSKASLGSSQADGNSSQVDGSSSNSQADSCNMKLNLSVPLLFDTTKLNCLPVWSAQGFILRYSQSSPNIWSFILSAPSPNSYIAMGFSPNGGMVGASAIVGWISSNGASGGLKQYYLAGTAQNQVVPDRGNLKILSNSTLMTSQSSHLYMAFQLETNRPLSGLIYAVGPNSIFPSAPSFALAQHQDKVSIKLDYAAGSSASENPYTNLKRRHGILNILGWGILIIMGAIVARHFKQWDPFWFYFHASVQSLGFLLGVIGVITGIVLHNQLHIDFNLHKTLGIIILILGCLQESKVRKYWNFYHHNLGRILIILAIVNIFYGIHLGKEGSGWKVGYGILRLFIILCGLSTTLVTSQDSCSSKLLQLQQPVPFDTSSLLCNPVWGDHSFILRYAKASSDVWSFIFSFPSNINAYAAIGFSNDGSMVGSTAIVGWMPSPGAGGMKQYFLGAKSPDQVTPDKGDLYMMNASIVPASTSLVYMIFQLKTTQPSSKLIFAIGPDGAFPNYPGYALAQHSDQISKVIDYKTGTTTSVIPYLNLRRSHGILNIAGWSILLIIGSIIARYFKHWDPTWFYLHASIQALAFVAAVVGIFIGLALSRKLKAESDVIHHKNIAILIIILGFLQVLAIVLRPGLESKIRKYWNWYHHNIGRILLCFAVGNSFYGLHLGGEGSKWFLAYGVSIAALVLIAVILEIRMWIVARKESQSRKTTSFPQSSTELAYY* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1806 909 PANTHER BNAC01G39800D PROTEIN 6 198 - -
Lja3g1806 909 ProSiteProfiles Cytochrome b561 domain profile. 693 888 IPR006593 -
Lja3g1806 909 ProSiteProfiles Cytochrome b561 domain profile. 365 548 IPR006593 -
Lja3g1806 909 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 539 885 - -
Lja3g1806 909 PANTHER BNAC01G39800D PROTEIN 539 885 - -
Lja3g1806 909 ProSiteProfiles DOMON domain profile. 575 686 IPR005018 -
Lja3g1806 909 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Lja3g1806 909 CDD DOMON_DOH 573 707 IPR045266 -
Lja3g1806 909 Gene3D - 705 897 - -
Lja3g1806 909 Gene3D - 378 551 - -
Lja3g1806 909 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 6 198 - -
Lja3g1806 909 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 213 533 - -
Lja3g1806 909 SMART 561_7 729 852 IPR006593 -
Lja3g1806 909 SMART 561_7 401 512 IPR006593 -
Lja3g1806 909 CDD DOMON_DOH 45 146 IPR045266 -
Lja3g1806 909 CDD Cyt_b561_FRRS1_like 379 535 - -
Lja3g1806 909 CDD DOMON_DOH 246 379 IPR045266 -
Lja3g1806 909 CDD Cyt_b561_FRRS1_like 717 881 - -
Lja3g1806 909 Pfam DOMON domain 591 665 - -
Lja3g1806 909 SMART DOMON_3 272 358 IPR005018 -
Lja3g1806 909 SMART DOMON_3 79 165 IPR005018 -
Lja3g1806 909 SMART DOMON_3 602 686 IPR005018 -
Lja3g1806 909 MobiDBLite consensus disorder prediction 195 215 - -
Lja3g1806 909 ProSiteProfiles DOMON domain profile. 246 358 IPR005018 -
Lja3g1806 909 PANTHER BNAC01G39800D PROTEIN 213 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1806 Lja-Chr3 20465396 20472784 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1806 - - lja:Lj3g3v2390800.1 1021.54