Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1803 ATGCTGGTTTCTTGGAAATTCCACACCACCCTATCAACCGCGCCACCGTGTCACTGCCGCAGTAACCGTCTCGCCGCCGTCTCTCTAAACCACACTCTCATCATCGCCACCCATCGACTAATGCCAACCGGCGAACTCCGCTACGCACCGCCGCCGACGGCGATGTCTAACTCCTCCTCCGGTGGCGGGTTCGAAGAAGAGGGGTGGCTGTGGGCGCAGATCAAGGCGGAGGCACGCCGTGACGCTGAGTCTGAACCAGCGCTCGCGAGTTACCTCTACTCCACGATTCTCTCACACTCGTCTCTAGAACGGTCACTGTCGTTCCACCTCGGGAACAAGCTCTGCTCCTCCACTCTTCTCTCCACGCTCCTCTACGACCTCTTCCTCAACGCGTTCTCCTCCGACCCTTCTCTCAGCTCCGCCGCCGTCGCTGACCTCCGCGCCGCCCGGGAGCGCGACCCCGCTTGTGTGTCGTACTCCCACTGCCTACTCAATTACAAGGGTTTCCTCGCCTGTCAGGCTCACCGCGTGGCGCACCTGCTGTGGGGGCAGTCGCGGCGGCCGTTGGCTCTGGCGTTGCATTCTCGAATTGCTGATGTTTTCGCGGTGGACATTCACCCGGCGGCGACGATTGGGAAGGGGATTCTGTTCGACCATGCTACTGGAGTGGTGGTGGGGGAGACGGCGGTGATTGGGAACAATGTGTCGATCCTGCACCACGTCACACTGGGTGGGACTGGGAAGATTGGTGGGGATCGCCACCCGAAGATTGGTGATGGGGTGCTAATTGGTGCTGGTGCTACCATTCTGGGGAATGTTAAGATTGGGGAAGGTGCCAAGATTGGTGCTGGCTCGGTGGTTTTGATCGATGTGCCGCCGCGGACGACTGCTGTTGGGAACCCGGCGAGGTTGGTTGGTGGCAAGGAGAAGCCGTCTAAGCATGAAGATGTGCCTGGGGAGTCCATGGATCATACTTCCTTCATGTCTGAATGGTCAGATTATATCATTTGA 1011 0.5915 MLVSWKFHTTLSTAPPCHCRSNRLAAVSLNHTLIIATHRLMPTGELRYAPPPTAMSNSSSGGGFEEEGWLWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFSSDPSLSSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWGQSRRPLALALHSRIADVFAVDIHPAATIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKIGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFMSEWSDYII* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1803 336 Gene3D serine acetyltransferase, domain 1 52 203 IPR042122 -
Lja3g1803 336 PANTHER SERINE ACETYLTRANSFERASE 52 336 - -
Lja3g1803 336 SMART SATase_N_2_a 70 174 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lja3g1803 336 Pfam Bacterial transferase hexapeptide (six repeats) 254 287 IPR001451 -
Lja3g1803 336 Gene3D Hexapeptide repeat proteins 204 325 - -
Lja3g1803 336 Pfam Serine acetyltransferase, N-terminal 70 174 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lja3g1803 336 CDD LbH_SAT 201 301 IPR045304 -
Lja3g1803 336 TIGRFAM cysE: serine O-acetyltransferase 144 303 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lja3g1803 336 SUPERFAMILY Trimeric LpxA-like enzymes 69 306 IPR011004 -
Lja3g1803 336 MobiDBLite consensus disorder prediction 307 321 - -
Lja3g1803 336 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 263 291 IPR018357 GO:0016740
Lja3g1803 336 MobiDBLite consensus disorder prediction 299 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1803 Lja-Chr3 20379501 20381386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1803 70 326 Miscellaneous Gene Families AT2G17640 55.253 1.15e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1803 K00640 - gmx:547632 524.628