Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1802 ATGGCGGCCTTTGATCACTTCGGGGGCATGGACGATGTTGAACTCAAACCCCGCTTGCTTCGCACCCTTATCAGTGACCACCTCCGTGACAAGAAGCGACCCTCTTTCAACCCCTCTGCGTTATCCAAGGTCATATCTCTGATCAGAACACATTCTCTTTTATCTGAGTCTTTTACAGAATCCATGGCCCCCGAGCTTGTTGAAGAATGGAAATCCGCTGTTACATCATGGGTCGAACGCATTGAGACCCTCCTTGAGAGCTCCACGCTAGATAAATGTTGGGCAGGTATATCTTTGCTGGGGGTTACTTGCGAGCTGTGCAGCGATGATCGTTTCGTAGACTCTTACTCTTCGTGGTTCGATAAGTTGAAGAAAAAACTACAGCCACCAGCAGATTCGGATCTAGTGAGGGTGGCTTGTTGCGCTTCAATATCTGATCTATTTGCAAGGTTAAGTGGATTTCCTAAGCTCAAGAAAGACTGTGTTGTGAAAGTCGTTCAGCCTGTTTTGAGGATGTTACAAGATGACAACTCAGAGGCAATTTTGGAAGCTGCAGTTCATGTGTTATGTACCATATTAACTTCATTTCGATCTTCTATTCAACATCATGATAATGATAAAGCTGTTGAATCTGCTATTGCTTCAAAACTTTTGTCCGGAGGATTCAGTCCTGATATGCTGAAGAATCTTGTACACTGCCTTGCATTACTTCCAAAATCAAGAGGAGATGAAGAAAGCTGGTCTTTGATGATGCAGAAGATTTTGATTTTAATAAATGATCAATTAAATTTGGCATTTCAAGGTTTAGAAGAAGACACCAAACGTAATGAGGTTAGTAGATTGTTGGTTCCCCCTGGAACACATCCTCCACCACCTTTAGGAGGACATATTTTGGCAGAAGCTAGTAACAAAGAAGCAAAGAGGTCTGAACAATCTCTAATGTCTAATGTCTCAGTGCTTATGTTTGGCTGTTGCACAATGCTTACAAATTCATATCCTGTTAAGGTAAACGTACCTGTACGCTCGCTATTGGCCCTTGTTGAGAGAATTTTGAGTGTAAATGGCTCTTTGCCACAAATGTCTTTTCCATTCATGACCTCGATGCAGCAAGAGAACATCTGTTCAGAACTTCCAGTTTTGCACTTGTGTAGCATGGAATTGCTTATGGCTGTCATAAAGGGCAGTGGAAGTGAACTAATACCACATGCTGCCTCTATTGTGCGTATCATCACACAGTACTTCAAGACATGTGCATTGCCTGAATTAAGGATTAAGGTCTATTCAGTGACAAAGACTCTGCTCATATCCATGGGTGTTGGAATAGCTATGTACCTCGAGCAGGAAGTTGTCAACAATGCTATTGCTGATCTGAGCACCATTAAGAATAAGAATAGTGTCACATTGAATGGTTCAAATTCAGACGTCTCTGTTAGAGTGCCACCACCAACAAATCATAGAAAAAGGAAGCATAGCAGTAATGCTGGGTCTCTTCAGGAGCATGTCGAAAGTGTTGGTTTAGGAGTGAAAGATCCCAAGAACCGTCCACTAACTCCAATTTCTCTGAGGATAGCTGCACTCGAGGCATTAGAAGCTCTTGTTACTGTGGCTGGTGCTTTAAGATCTGAACGGTGGAGACAAAAAGTTGATAGTCTTTTGATGGACATAGCAAATGATTCTTTCAAAGAAGGACCATCTAGTGAAGAAATAAGTGTGCTTCAGCAAAAGGATCCTGCTGCAACTGCCGCAGATTTGCAGCTTGCTGCATTGCGTGCTCTTTTGGCATCTTTTCTTTCGTTTGCTCGGGTGCGACCTCCATATATATCCCAGGGCCTTGGACTATTCCGTAGAGGAAGGCAACAAACAGGAACTAAACTTGCTGAGTTCTGTGCCCATGCTCTGTTAACCTTGGAAGTGCTGATACATCCTAGGGCACTTCCACTATTAAATTATGACTGTGCAATTAACAATGAAGCTCAGCGCAATTTCCAAGATGAATACACTAGCTGGAACAGCGGCGGCGCATTTGGTTTACCACAAACTGCACCTCCAGACTATGAAGATAATTTATATGCTAGTTGGCTGGGAAATGGCAATAATGAAGCTGATATGTCATTGGCTAAAGAGGCAGAACACACCAAAAGGCCTTCTGAAGCTTGCAGAGATAATGACCCCAAAGTGCTTTCTGCAAACCTGTCCTCTGACACCATCATCCAAGAGAGGAGTGAGATGGCACCTGAGACTGCCACCGGCAAAGATGTTGAAATGAGGACCGAGGAGGGTGCGTTCAGTTTCATGTCAGGTCAACCCGGAGATTCTACGGTGCTATTTAAAGAACCCGTCTCTTGCACCACAAGCATCCCTGACATTGACGCTCACTTCGGTGCTGTAGCTACTGAGATATCTGAGAGGGTTGTTTCTGACAGTGCCATGCCTGATAGGAACAGTTCATTGATAGGAACATCAGACTCCAAAAGGACCAGGGAATTTGCATTTAAATTAGATTATGGCAGCTCAGAGGCTGAGGATGATCCTTTTCCTGCTATTGTGGATGCAGACCCAGATACAGACTCTGAATAA 2577 0.4369 MAAFDHFGGMDDVELKPRLLRTLISDHLRDKKRPSFNPSALSKVISLIRTHSLLSESFTESMAPELVEEWKSAVTSWVERIETLLESSTLDKCWAGISLLGVTCELCSDDRFVDSYSSWFDKLKKKLQPPADSDLVRVACCASISDLFARLSGFPKLKKDCVVKVVQPVLRMLQDDNSEAILEAAVHVLCTILTSFRSSIQHHDNDKAVESAIASKLLSGGFSPDMLKNLVHCLALLPKSRGDEESWSLMMQKILILINDQLNLAFQGLEEDTKRNEVSRLLVPPGTHPPPPLGGHILAEASNKEAKRSEQSLMSNVSVLMFGCCTMLTNSYPVKVNVPVRSLLALVERILSVNGSLPQMSFPFMTSMQQENICSELPVLHLCSMELLMAVIKGSGSELIPHAASIVRIITQYFKTCALPELRIKVYSVTKTLLISMGVGIAMYLEQEVVNNAIADLSTIKNKNSVTLNGSNSDVSVRVPPPTNHRKRKHSSNAGSLQEHVESVGLGVKDPKNRPLTPISLRIAALEALEALVTVAGALRSERWRQKVDSLLMDIANDSFKEGPSSEEISVLQQKDPAATAADLQLAALRALLASFLSFARVRPPYISQGLGLFRRGRQQTGTKLAEFCAHALLTLEVLIHPRALPLLNYDCAINNEAQRNFQDEYTSWNSGGAFGLPQTAPPDYEDNLYASWLGNGNNEADMSLAKEAEHTKRPSEACRDNDPKVLSANLSSDTIIQERSEMAPETATGKDVEMRTEEGAFSFMSGQPGDSTVLFKEPVSCTTSIPDIDAHFGAVATEISERVVSDSAMPDRNSSLIGTSDSKRTREFAFKLDYGSSEAEDDPFPAIVDADPDTDSE* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1802 858 MobiDBLite consensus disorder prediction 471 496 - -
Lja3g1802 858 Pfam rRNA processing/ribosome biogenesis 18 220 IPR012583 -
Lja3g1802 858 SUPERFAMILY ARM repeat 39 569 IPR016024 -
Lja3g1802 858 MobiDBLite consensus disorder prediction 835 858 - -
Lja3g1802 858 Gene3D - 45 469 IPR011989 -
Lja3g1802 858 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 10 855 - -
Lja3g1802 858 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 10 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1802 Lja-Chr3 20357233 20376926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1802 - - aprc:113850109 1084.71