Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1785 ATGAATGGTGATGAACCTTACAGTGCTATTGAGTCACAGTACATTAGGAGACATCACAAGCATGAACTCAGGGACAATCAGTGCACTTCTGCACTTGTCAAACACATAAAGGCCCCTGTTCATCTTGTGTGGTCTCTGGTTAGAAGATTTGATCAGCCTCAGAAGTATAAACCATTTGTGAGCAGGTGTATCATGCAAGGAGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGTCTTCCAGCAACAACTAGCACTGAGAGGTTGGAACAGCTTGATGATGAGGAACACATCCTTGGTATCAGGATTGTTGGAGGTGATCACAGGCTCAGGAACTATTGTTCCATAATCACTGTCCATCCGGAGGTCATCGATGGAAGACCCGGTACCATGGTGATTGAGTCATTTGTGGTGGATGTGCCTGAAGGGAACACCCGAGATGAAACTTGTTACTTCGTGGAGGCTCTGATCAGGTGCAACCTAAGCTCTTTGGCTGATGTCTCAGAGAGGATGGCCGTGCAGGGTCGAACCGATCCGCTCAACCATTAA 558 0.4659 MNGDEPYSAIESQYIRRHHKHELRDNQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYCSIITVHPEVIDGRPGTMVIESFVVDVPEGNTRDETCYFVEALIRCNLSSLADVSERMAVQGRTDPLNH* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1785 185 CDD PYR_PYL_RCAR_like 28 172 - -
Lja3g1785 185 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 8 182 - -
Lja3g1785 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Lja3g1785 185 PANTHER - 8 182 - -
Lja3g1785 185 Gene3D - 2 181 IPR023393 -
Lja3g1785 185 SUPERFAMILY Bet v1-like 28 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1785 Lja-Chr3 20150446 20153318 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1785 K14496 - gmx:100500065 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1785 3 20150446 20153318 Lja3g1785 3 20150446 20153318 ECH