Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1780 ATGAAGAACTTGCAGAGCACGGAAGAATTACAATCGTCAACTCAAGCTTCTCATGAGCCCAAGATTGAACAACCAAACAATCATACGACTGATGCTCCTGTCACAGACTCAGGTTCAGCTTCTGCTTCAAGCAATGATAGCAAAAAGGTTTCACGACAGGATATTGAGCTGGTCCAGAATCTAATAGAAAGGTGTCTGCAATTATATATGAATAAAGATGAGGTGGTTAAAACGCTACTGACTCGGGCAAAGATAGATCCTGGATTTACCACTCTTGTGTGGCAGAAGTTGGAAGAAGAGAATGCTGATTTCTTCAGGGCCTACTATATTTGGCTAAAATTGAAAAAGCAAATACTTCTATTCAATCATTTACTGGAGCATCAGTATCATCTGATGAAGTCTCCCATGCCTGCAAAGGTTCCATTGGCTCCAATGCAGAATGGAATCCATCCAATGCCTATCAACAACCTGCCTATCGGATACCCAGTTCTACAGCAACATCCCATTGCAGCTGCAGGTCAACCTCATATTGACCCCATGGGTTGTGGCATGTCAAGTTGTCATGTGGTTAACGGAGTCCCTGCACCGAGCAATTTTCATCCCATTCGGATGAATTCTGGGAATGACATGGTGATGGACCACAGCGCTCCTGATGCGGCTCCAACGATTCCACCAAATGGTGTAATGTCATCCGAAATGCCAGTGAGTCCGACTTCAGCATCCAGTGGTCATTTCCCCTTCACTGCATCAGAAATATCAGGAATGGGCACAGATGCATCAGCTCTTGATACCGCATTTACATCTGATGTGGCAAGTTCAGGAGGACTACAACTTGCACCAGATGGCAGCAACGGAATTTCTAGATCGCTCGATCAAATTCAGTGGAATTTTAGCCTATCTGATCTGACAGCAGATTTGCCAAACTTGGGAGACCTAGGAGCTCTTGGAAACTATCCTGGCTCACCATTTTTGCCATCTGATTCTGACATGTTGCTCGAGTCACCAGATCAACAGGATATAGTGGATGATTTCTTTGCTAACTCTGAGCCACAATGTTCTCAATCAGATGAGGAGAAAACTTAA 1083 0.4432 MKNLQSTEELQSSTQASHEPKIEQPNNHTTDAPVTDSGSASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENADFFRAYYIWLKLKKQILLFNHLLEHQYHLMKSPMPAKVPLAPMQNGIHPMPINNLPIGYPVLQQHPIAAAGQPHIDPMGCGMSSCHVVNGVPAPSNFHPIRMNSGNDMVMDHSAPDAAPTIPPNGVMSSEMPVSPTSASSGHFPFTASEISGMGTDASALDTAFTSDVASSGGLQLAPDGSNGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPGSPFLPSDSDMLLESPDQQDIVDDFFANSEPQCSQSDEEKT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1780 360 PANTHER OS02G0137100 PROTEIN 1 359 IPR006476 -
Lja3g1780 360 PANTHER HELICASE WITH ZINC FINGER PROTEIN 1 359 - -
Lja3g1780 360 MobiDBLite consensus disorder prediction 323 360 - -
Lja3g1780 360 MobiDBLite consensus disorder prediction 1 48 - -
Lja3g1780 360 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 55 110 IPR006476 -
Lja3g1780 360 MobiDBLite consensus disorder prediction 1 49 - -
Lja3g1780 360 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1780 Lja-Chr3 19989845 19995436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1780 - - gmx:100809603 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1780 3 19989845 19995436 Lja3g1780 3 19989845 19995436 ECH