Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1777 ATGCTAATCGTTGCAGTCATCACTGCATTTAGCGCCGTTGCGGTTGTCGGAATTTGCTTCGGCGCAATCAACGGCAGGCTTCGGAGGAAAAGCGCGGTGGGGTTCTTCCATCCATACACCAACGACGGCGGCGGCGGAGAGAGGGTTCTGTGGTGCGCGGTGAGAGGCATCCAAGAGGAGAATCCTGACCTCCAGTGCCTCGTCTACACCGGAGATCACGATGCCACACCACAATCCTTGATGACTCGAGCCCTTGATCGCTTTGGAGTCAGTCTCCTCTCCCCTCCTCTGGTGGTGCATTTGTACAAGAGAAAGTGGATTGAAGAAACCACTTATCCACACTTTACAATGATTGGCCAAAGTCTGGGTTCTGTGTATCTTGCATGGGAAGCTTTGTGCAAGTTTACCCCTTTATATTATTTTGACACGAGTGGATATGCTTTTACATATCCACTTGCCCGCTTGTTTGGATGCAAAGTTATTTGCTATACACATTACCCTACTATCAGTTCAGACATGCTATCTCGTGTTCGTCAGCGCAGCTTGATGTATAATAATGATGCCGTAGTTGCAAAAAGTGCTTGGCTTTCTCGGTGCAAAATAGTCTATTATACATTCTTCAGTTTCTTGTATGGGATTGTTGGATCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACCAAATCTCATATTGAAAAGCTTTGGGGAGTTCCAGATCGTATTAAGCGAGTCTATCCTCCTTGTGATACTTCAGGGCTTCAGGTGCTTCCTTTGGAAAGATCAGCTGAAATTCCTGTAATAATATCTGTTGCGCAATTTCGGCCAGAGAAGGCTCATACTCTCCAACTTGAGGCCTTTTCAGCTGCTATTAAGAGATTAGATTCTGGCTTGCCAAAACCTAAGCTCCAGTTTGTGGGCAGCTGTAGAAATAAATCAGATGAGGAAAGACTTCAAATGTTAGAAAAGAAAGCAATTGAGCTGAATGTGAATGAACAAGTGGAATTTTACAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGCTGGTGCTGTTGCTGGCATCCATTCCATGACAGATGAGCATTTTGGCATCAGTGTTGTAGAATATATGGCTGCTGGTGCCATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTATTAGAGGAAGATGGACAAGAAACAGGATTCCTTGCCTGCACTGTTGAAGAATATGCAGACGCCATGTTGAAAATTATAAGAATGCCAGAGATGGAGAGACTTAAGATGGCTGCTGCTGCAAGGAGACGAGCTGGAAGGTTTTCTGAGCAGAGATTTTCTGATGACTTCAAAGCTGCAGTGCGACCAATTCTCAGTCATACTTCTAGATGA 1383 0.4476 MLIVAVITAFSAVAVVGICFGAINGRLRRKSAVGFFHPYTNDGGGGERVLWCAVRGIQEENPDLQCLVYTGDHDATPQSLMTRALDRFGVSLLSPPLVVHLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTPLYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLSRVRQRSLMYNNDAVVAKSAWLSRCKIVYYTFFSFLYGIVGSCAHLAMVNSSWTKSHIEKLWGVPDRIKRVYPPCDTSGLQVLPLERSAEIPVIISVAQFRPEKAHTLQLEAFSAAIKRLDSGLPKPKLQFVGSCRNKSDEERLQMLEKKAIELNVNEQVEFYKNVTYRDLVGLLAGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQETGFLACTVEEYADAMLKIIRMPEMERLKMAAAARRRAGRFSEQRFSDDFKAAVRPILSHTSR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1777 460 Gene3D Glycogen Phosphorylase B; 254 438 - -
Lja3g1777 460 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 23 455 IPR038013 GO:0004377
Lja3g1777 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 35 454 - -
Lja3g1777 460 Coils Coil 311 331 - -
Lja3g1777 460 CDD GT4_ALG11-like 32 446 IPR038013 GO:0004377
Lja3g1777 460 Pfam ALG11 mannosyltransferase N-terminus 31 236 IPR031814 -
Lja3g1777 460 Pfam Glycosyl transferases group 1 266 433 IPR001296 GO:0016757
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1777 131 456 Glycosyltransferase AT1G78800 25.740 2.21e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1777 K03844 - gmx:100808662 815.068