Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1769 ATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCTTGCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGAGTTCAGGGAAATCTTCAGTGTTGGAGAGCATTGTTGGGAAGGATTTTTTGCCTCTTGTTTTGCAGCTTCATAAGATTGATGATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGATTTTGCTGCTGTAAGACAAGAGATAGCTGATGAGACTGATAGAGAAACAGGTCGCTCCAAGGGTATTTCATCAGTTCCCATCCATCTCAGTATCTACTCTCCTAATGTTGTCAATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGAGGGTCAACCAGATAGCATTGTGCAAGACATTGAAAATATGGTTCGGGCCTTTATCGAAAAGCCGAATTGCATCATTTTGGCAATATCTCCTGCTAATCAAGACCTTGCTACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGGGAAAGGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAAGGTACTGATGCAGTTGAAATCCTTGAAGGTAGATCATATAAGTTAAATTACCCTTGGATTGGTGTTGTTAATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACGTAGAGAGAATGAGTATTTTGCAAACACCCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGGTGATGTCTAAGCATTTAGAAACTGTTATCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAGTTGGAGACAGAATTGACCCGTATTGGGAAACCTATTGCCGCTGATACTGGAGGGAAGTTGTACATGGTAATGGAAATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATACGATCTGGTGGTGAGAAAATTTACCAAGTATTTGATAATCAATTTCCAGCAGCTCTAAAAAGGCTGCAGTTTGACAAGCATCTATCAATGGACACTGTACGCAAACTAATAACTGAAGCAGATGGGTATCAACCTCATCTCATTGCTCCTGAGCAAGGATATCGCCGACTTATTGAATCTTGCATAGTATCAATGAGAGGCCCTGCTGAAGCAGCAGTTGATGCTGAATTAAAGCAGTACCCTACCTTGAAAGTCGAGCTCGGAAGTGCAGCTGTTGATTCACTGGAAAGGATGAGAGAAGAAAGTAAGAAAGCAACTCTGCAATTAGTAGACATGGAATGTGGTTATTTGACAGTTGAATTCTTTCGCAAACTTCCTCAAGACGCAGAGAAGGGCGGAAATCCAACCCACTCACTTTTTGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACCACTGTCTTGTCATATGTGAACATGGTATGTGGGAGTCTAAGGCATACCATTCCCAAGTCTGTAGTTTATTGTCAAGTGCGGGAAGCAAAGCGCAGTTTACTGGATCATTTCTTCACAGAGTTGGGGAAAAAAGAGGGTAAACAACTAGCTGCATTGCTGAATGAGGATCCAGCAATCATGCAGCAAAGGACCTCACTTTCTAAGAGGTTAGAGCTGTATAGAAGTGCCCAATCAGAAATTGAGGCTGTTGCATGGGACAAGTAA 1749 0.4277 MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPLVLQLHKIDDSREYAEFMHLPRKRFTDFAAVRQEIADETDRETGRSKGISSVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVQDIENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVEILEGRSYKLNYPWIGVVNRSQADINKSVDMIAARRRENEYFANTPEYRHLASRMGSVHLGKVMSKHLETVIKSRIPGLQSLINKTIIELETELTRIGKPIAADTGGKLYMVMEICRTFDQIFKDHLDGIRSGGEKIYQVFDNQFPAALKRLQFDKHLSMDTVRKLITEADGYQPHLIAPEQGYRRLIESCIVSMRGPAEAAVDAELKQYPTLKVELGSAAVDSLERMREESKKATLQLVDMECGYLTVEFFRKLPQDAEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGSLRHTIPKSVVYCQVREAKRSLLDHFFTELGKKEGKQLAALLNEDPAIMQQRTSLSKRLELYRSAQSEIEAVAWDK* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1769 582 Pfam Dynamin family 37 202 IPR045063 -
Lja3g1769 582 PANTHER DYNAMIN-RELATED PROTEIN 1B 2 581 - -
Lja3g1769 582 CDD DLP_1 34 289 IPR001401 GO:0003924|GO:0005525
Lja3g1769 582 Pfam Dynamin GTPase effector domain 486 578 IPR003130 GO:0003924|GO:0005525
Lja3g1769 582 Gene3D - 1 298 IPR027417 -
Lja3g1769 582 Pfam Dynamin central region 210 460 IPR000375 -
Lja3g1769 582 PANTHER DYNAMIN 2 581 IPR022812 -
Lja3g1769 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 297 IPR027417 -
Lja3g1769 582 SMART dynamin_3 1 240 IPR001401 GO:0003924|GO:0005525
Lja3g1769 582 Gene3D Dynamin, middle domain 315 545 - -
Lja3g1769 582 ProSiteProfiles GED domain profile. 490 582 IPR020850 -
Lja3g1769 582 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 289 IPR030381 GO:0005525
Lja3g1769 582 PRINTS Dynamin signature 171 189 IPR022812 -
Lja3g1769 582 PRINTS Dynamin signature 34 52 IPR022812 -
Lja3g1769 582 PRINTS Dynamin signature 190 206 IPR022812 -
Lja3g1769 582 PRINTS Dynamin signature 121 138 IPR022812 -
Lja3g1769 582 PRINTS Dynamin signature 213 232 IPR022812 -
Lja3g1769 582 SMART GED_2 485 578 IPR003130 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1769 Lja-Chr3 19886305 19893200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1769 - - gmx:100793097 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1769 3 19886305 19893200 Lja3g1769 3 19886305 19893200 ECH