Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1742 ATGGGGAGTGTGCCATGGAAGCAGCTTCTTCTCAACGCTTTGGAATCCAACGCTCACCTCAAGCACTCTTCTTACATGCAGCTCGCAACCGTAGGAACCAACGGAAAACCTTCGAATCGCACCGTCGTATTCAGAGGGTTCCAAGACAACACTGATAACATCCAAATTAACACCGATGCTCGAACCCGCAAGATTGAAGGGCTCAAGGTTTGCTCCTCTGCTGAGATATGTTGGTATTTCACAGATTCCTGGGAGCAATTTCGGATAAATGGGAATGTAGATATCATCGATGGGTCGAATCCTGACCCACTAAAACTTCAGCAAAGAGAAAAGTCCTGGTTTGCCAGTTCACTGAGATCAAGGTCGCAATATATGTGTCCCAACCCTGGACTTCCTTGTCTAAATGAACAAGCACAACCGGAAATATCATTGGATCCTTCTACAGGTCCAGTTGATGCTTTTTGTCTACTGATTCTAGAACCAGATGGGGTTGATTACTTGAATCTGAAGAATAACCAGAGGCTAGCATTCAAATCAAGAGTGGGTGATGCAGCAAAGAAAAGCTGGGTTATGGAGAGGGTCAATCCATGA 591 0.4535 MGSVPWKQLLLNALESNAHLKHSSYMQLATVGTNGKPSNRTVVFRGFQDNTDNIQINTDARTRKIEGLKVCSSAEICWYFTDSWEQFRINGNVDIIDGSNPDPLKLQQREKSWFASSLRSRSQYMCPNPGLPCLNEQAQPEISLDPSTGPVDAFCLLILEPDGVDYLNLKNNQRLAFKSRVGDAAKKSWVMERVNP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1742 196 Pfam Pyridoxamine 5'-phosphate oxidase 4 96 IPR024624 GO:0010181
Lja3g1742 196 Gene3D - 2 196 IPR012349 -
Lja3g1742 196 SUPERFAMILY FMN-binding split barrel 5 196 - -
Lja3g1742 196 TIGRFAM PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 4 196 IPR024015 -
Lja3g1742 196 PANTHER PYRIDOXINE/PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2 3 196 - -
Lja3g1742 196 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 3 196 IPR000659 GO:0004733|GO:0008615|GO:0010181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1742 K00275 - gmx:100779815 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1742 3 19468483 19471159 Lja3g1742 3 19468483 19471159 ECH