Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1711 ATGCAGCAGACACCGCAAATGATTCCTATGATGCCTTCATTCCCATCTCAAAACATTACCACCGAACAGATTCAAAAATTTCTTGATGAGAACAAGAAGCTGATTCTTGCAATATTGGACAATCAAAATCTTGGGAAACTTGCAGAATGTGCCCAATACCAAGCTCAGCTTCAAAAGAATTTGATGTACTTAGCTGCAATTGCTGATTCACAGCCACAAACACCTGCCATGCCTCCACAGATGGCGCCACATCCTGCGATGCAACAAGGGTTCTACATGCAACATCCTCAGGCTGCAGCAATGGCTCAGCAACAAGGAATGTTCCCCCAAAAAATGCCAATGCAATTTGGCAATCCGCATCAAATGCAGGATCAGCAGCAACAGCAGCAGCAGCAGCAGCTACACCAGCAGGCCATCCAAGGGCAGATGGGGCTGAGACCTGGAGGGATGAATAACGGCATGCATCCAATGCACAGCAACGAGGCTGCTCATGGAGGCGGCAGCAGTGGCGGTCCACCTTCGTCTGCCGGTCCGAATGATGCCCGTGGTGGAAACAAGCAAGATGCTTCTGAGACTGGGACAGCTGGTGGAGACGGCCAAGGAAGCTCTGCTGCGGCGCACAACAGTGGAGATGGTGAATCTTCTTATCTTAAGGGTTCAGAAGAGGCAAAGTGA 675 0.5007 MQQTPQMIPMMPSFPSQNITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADSQPQTPAMPPQMAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQQQQQQQQLHQQAIQGQMGLRPGGMNNGMHPMHSNEAAHGGGSSGGPPSSAGPNDARGGNKQDASETGTAGGDGQGSSAAAHNSGDGESSYLKGSEEAK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1711 224 MobiDBLite consensus disorder prediction 110 140 - -
Lja3g1711 224 PANTHER BNAA09G51550D PROTEIN 1 191 - -
Lja3g1711 224 MobiDBLite consensus disorder prediction 185 215 - -
Lja3g1711 224 MobiDBLite consensus disorder prediction 110 224 - -
Lja3g1711 224 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 191 IPR044779 GO:0003713
Lja3g1711 224 Pfam SSXT protein (N-terminal region) 17 74 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1711 Lja-Chr3 19027100 19031505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1711 - - vun:114167142 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1711 3 19027100 19031505 Lja3g1711 3 19027100 19031505 ECH