Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1708 ATGCCTTTGTTATGCTTGAAGCTAGGGGGGATGAGGATATCACAAAAAGCCTTCGCATTAACTCTGTTTTTCTCTATTGTGCTTTGCACTCCACCAGAGGATCCAATCAAGTGCTCTTCATCACAGAACACAAGCTGCACCATCACAAACTCCTATGGCATGTTCCCTGACAGAACCATCTGCCAAGCTTCTCAAGTTTTGTACCCAACTACAGAGTTGGAACTTGTGTCAATGGTTGCATCAGCAACCAGAAACAAGAACAAGATGAAAGTTGCTACCCGTTTTTCCCACAGCATTCCGAAGCTGGTGTGCCCTGAAGGCCAAAATGGGTTGCTGATAAGCACCAAGTATCTCAACAAAGTGTTGAAGGTTGATGTGGGAGCAAAGACAATGACGGTGGAGAGTGGAGTTACAATGAAGATGATAATCAATGAGGCTGCAAAGGGGAATTTGGCTTTGCCTTATGCCCCATATTGGTTGGGCTTGACAATTGGTGGCCTTATGGGAACAGGTGCTCATGGAAGCTCATTATGGGGGAGAGGAAGCTCTGTTCATAATCATGCGTTGGAGATTAGGATTGTTAGGCCTGCAGGTCCTGAAGATGGGTATGCTAAGGTTGAGGTTCTGAATGAACAACATGAAGATTTCAATGCAGCTAAAGTGTCACTAGGTGTGCTGGGAGTTATTTCACAGATTACTCTGCAACTCGAACCACTTTTCAAGCGGTCCATCACCTATTTGACAAAAGATGATTCGGATTTGGGAGACCAAGCAGCAGCTTTTGGACATGAACATGAGTTTGCTGATATAACTTGGTACCCAAGTCAACACAAGGCTGTCTACCGTGTTGATGATCGTGTCCCCATGAGTACATCGGGCAATGGTCTTTATGATTTTGTCCCTTTTCGCCCCACTCCTTCACTTGAATTGGCTCTCATAAGATCCACAGAGGATCTTCATGAATCCACTAGTGATGCTGATGGAAAGTGCAGACTTGCAAAGTTAACAACGAGTGCCCTCCTCACCACAGCTTATGGGCTTACTAATAATGGTGTAATTTTCACAGGGTACCCTGTAATTGGATTTCAGAACCGTGTTCAGGCATCAGGGTCATGCTTAGATAGTCTTCAAGATGGAAAATTCACAACATGTGCCTGGGACTCAAGAGTGAAAGGAGAGTTCTTTCACCAAACCACATTCAGCATTGGCTTATCTGTTGTGAAGAATTTCATTGAAGATGTGCAGAAGCTAGTTCAGTTAGTGCCTAAAGGACTATGTGGCATGGAGAATTACAATGGAATTCTCATGCGTTATGTGAAGGCTTCAAGTGCTTACTTGGGGAAGCAAGAGGATGCTCTAGACTTCGATATCACGTACTACCGAAGCAAGGATGCAATGACTCCTAGGCTTTATGAAGACATTCTTGAAGAGATTGAGCAGCTTGGGATTTTCAAGTATGGAGGGTTACCTCATTGGGGTAAGAATAGGAACTTGGCATTTGGCGGAGTGATTAATAAGTATAAAAATGCTGGGAAGTTTTTGAAGGTGAAAGAGAAGTTTGATTCACAAGGGCTTTTCTCTAGTACTTGGACTGATCAAGTGCTTGGGCTGAAAGAAGGTGTGACAATAGTGAAGGATGGGTGTGCATTGGAAGGTTTGTGCATTTGCTCACAGGATAGCCACTGCAATCCAAGTAAAGGCTACTTCTGCAGACCAGGGAAAGTCTACAAGGAAGCAAGGGTTTGTACACATTTAAAATAA 1761 0.439 MPLLCLKLGGMRISQKAFALTLFFSIVLCTPPEDPIKCSSSQNTSCTITNSYGMFPDRTICQASQVLYPTTELELVSMVASATRNKNKMKVATRFSHSIPKLVCPEGQNGLLISTKYLNKVLKVDVGAKTMTVESGVTMKMIINEAAKGNLALPYAPYWLGLTIGGLMGTGAHGSSLWGRGSSVHNHALEIRIVRPAGPEDGYAKVEVLNEQHEDFNAAKVSLGVLGVISQITLQLEPLFKRSITYLTKDDSDLGDQAAAFGHEHEFADITWYPSQHKAVYRVDDRVPMSTSGNGLYDFVPFRPTPSLELALIRSTEDLHESTSDADGKCRLAKLTTSALLTTAYGLTNNGVIFTGYPVIGFQNRVQASGSCLDSLQDGKFTTCAWDSRVKGEFFHQTTFSIGLSVVKNFIEDVQKLVQLVPKGLCGMENYNGILMRYVKASSAYLGKQEDALDFDITYYRSKDAMTPRLYEDILEEIEQLGIFKYGGLPHWGKNRNLAFGGVINKYKNAGKFLKVKEKFDSQGLFSSTWTDQVLGLKEGVTIVKDGCALEGLCICSQDSHCNPSKGYFCRPGKVYKEARVCTHLK* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1708 586 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 31 583 IPR010030 -
Lja3g1708 586 SUPERFAMILY FAD-binding/transporter-associated domain-like 56 238 IPR036318 GO:0050660
Lja3g1708 586 Gene3D - 121 238 IPR016169 -
Lja3g1708 586 Pfam FAD binding domain 64 198 IPR006094 GO:0050660
Lja3g1708 586 ProSiteProfiles PCMH-type FAD-binding domain profile. 59 239 IPR016166 GO:0071949
Lja3g1708 586 PANTHER GULONOLACTONE OXIDASE 19 585 - -
Lja3g1708 586 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 19 585 - -
Lja3g1708 586 Pfam D-arabinono-1,4-lactone oxidase 429 533 IPR007173 GO:0003885|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1708 Lja-Chr3 18994545 19000937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1708 K00103 - gmx:100790483 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1708 3 18994545 19000937 Lja3g1708 3 18994545 19000937 ECH