Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1700 ATGGGAAACTGCGTGTTTAAAGGGTTTCATCACGGGGTCTTAGAAGACCACATGATGGTGAGGGTAGTTACCTCAAACGGAGGCATCATGGAACTCTACTCTCCTATAACAGCGGACTGCATAACCAACGAGTTCCCCGGCCACGGCATCTTCCGAAGCCACCGTAGCATATTCTCCGAACCTCTCCCCAAAAACCAAGAGCTCCAAGGTGGTGAAGTCTACTACCTCCTGCCTCTCAACCTCAACCCTTCTTCTACCTCCACCACCAACAGCATCAACACACAGCTACCTGAAACCGCCGCCACTAACTCGACGCCGTATAGGATGTCCACGTGCGAGAAAAACAACAGCAACAACAGCAACAGTTGGTCGGAACCTGAAGTGTTTCCGAGGTACAACAGCAGCGGAGTGTGGAAGGTGAAGCTGGTAATCAGCCCCGAGAAGCTGTCGGAGATTTTGTCGCAGGAGTCAAGAACGGAGGCGTTGATAGAGAGTGTCAGGACCGTGGCAAAGTGCGGCAACGGGGTGCCGTCGTCGGTGGCTAACTCCGACCAGTGGAGTGTGTCCAGTAGTTGGAAAGGTTCTATGATAGAGAAGATGGCTTTAGATAATTCATATTAA 621 0.5153 MGNCVFKGFHHGVLEDHMMVRVVTSNGGIMELYSPITADCITNEFPGHGIFRSHRSIFSEPLPKNQELQGGEVYYLLPLNLNPSSTSTTNSINTQLPETAATNSTPYRMSTCEKNNSNNSNSWSEPEVFPRYNSSGVWKVKLVISPEKLSEILSQESRTEALIESVRTVAKCGNGVPSSVANSDQWSVSSSWKGSMIEKMALDNSY* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1700 206 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 191 - -
Lja3g1700 206 PANTHER DUF4228 DOMAIN PROTEIN 1 191 - -
Lja3g1700 206 Pfam PADRE domain 1 174 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1700 Lja-Chr3 18846107 18847037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1700 - - lja:Lj3g3v2515210.1 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1700 3 18846107 18847037 Lja3g1700 3 18846107 18847037 ECH