Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1698 ATGGCGGCAGTGGCTGCTTCAAGTAACTTAGTGTCCAGCAGTTCTTACATCCACCACAGATCAATTCTCTCATATGAGTCTAAAGCTGCATCGACGGGACTTCGATCTCTAAGGCAGACAAATACTCACAATGGACTGAGAATTTTGAACCTGGTGGATGAGCTGTTAAACAGAACCCCAATTCAAGTTAAGGCAGTGCAAGCTAGGAGGAAGGGTCTTCAAGGCAAGAATGTCAGGCCAACAGGTGTCATAATTTGTGGCATGAATTTGATCTTCCTCGGGACGGAGGTTGGTCCGTGGAGCAAAACTGGTGGCTTAGGAGATGTTTTAGGAGGTCTGCCGCCAGCATTAGCAGCTAATGGGCATAGAGTTATGACCATAGCTCCACGCTATGACCAGTACAAAGATGCATGGGATACAAGTGTAACAATTGAGGTGAAAGTAGGAGACAAAACAGAAAAAGTTGGCTTCTTCCACTGCCATAAGAGAGGAGTTGATCGTGTATTTGTAGATCACCCTATTTTTCTTGAAAAGGTCTGGGGGAAAAGTGGAACCAAACTTTACGGGCCTACTGCAGGAGAGGATTACCAAGACAATCAACTACGTTTTAGCCTGTTCTGCCAGGCAGCTTTGGAAGCACCAAGGGTTCTGAATCTTACGAGCAATAAATATTTCTCAGGACCATATGGTGAAGATGTCATTTTCATCGCCAACGATTGGCACACTGCCCTTATCCCTTGCTACTTGAAATCTATGTACCAGTCAATCGGCATCTATAAGAATGCCCGAGTTGTTTACTGCATTCACAACATTGCTTACCAAGGCAGATTTGCATTTGCGGACTTTCAACTTCTCAATCTCCCTGATCAATTCAAAAGCTCCTTTGACTTCCTTGATGGGCATGTTAAACCAGTGATTGGAAGGAAAACCAATTGGATGAAAGCTGGAATTTTAGAATCAGACCTGGTGTTAACTGTTAGTCCATACTATGCTGAGGAACTTGTGTCAGGCCCAGATAAAGGAGTGGAGTTGGACAACATCATTCGCAGAACTGGTATTACTGGAATTGTGAATGGCATGGATGTTCAGGAGTGGAATCCATCCACGGACAAATATTTAACAGTCAAATACAATGCTTCAACAGTGGTGGAAGGAAAGGCTCTTCTGAAAGAAGCCCTCCAAGCAGAAGTTGGGTTGCCGGTCGACAGAAATATTCCTCTCATCGGTTTCATTGGTAGGCTTGAAGAGCAAAAGGGTTCTGATATTCTTGTGGCAGCCATTCCCCAATTTATTAAGGAGAATATTCAGATAGTAGCCCTTGGAACAGGAAAAAAACAAATGGAAAAGCAGCTTGAGCAACTCGAAATAGCATACCCTGACAAGGCCAGAGGAGTTGCAAAATTCAATGTTCCCCTAGCCCACATGATAATTGCTGGAGCTGATTTTATATTGATTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGAACTGTACCAATTGTTGCCTCAACAGGTGGATTAGTCGACACAGTCAAAGAAGGTTTCACTGGTTTTCAGATGGGTTCCTTCAATGTTGAGTGTGAAGCTGTGGATCCTGCGGATGTGGATGCTCTAGCAAAGACTGTCAAAAGGGCCCTTGCAGTACATGGAACTCTAGCTTTTACAGAAATAATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAGGTGGGAGGAAGTGTTGCTAAGCTTGGGAGTTCCCGGCAGTGAAGCTGGAATTGAGGGAGAAGAAATTGCTCCACAAGCAAAGGAAAACTTGGCAACTCCATGA 1845 0.4428 MAAVAASSNLVSSSSYIHHRSILSYESKAASTGLRSLRQTNTHNGLRILNLVDELLNRTPIQVKAVQARRKGLQGKNVRPTGVIICGMNLIFLGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLTVKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKENIQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRALAVHGTLAFTEIIKNCMAQDLSWKGPAKRWEEVLLSLGVPGSEAGIEGEEIAPQAKENLATP* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1698 614 Gene3D Glycogen Phosphorylase B; 361 571 - -
Lja3g1698 614 Hamap Glycogen synthase [glgA]. 88 589 IPR011835 GO:0004373
Lja3g1698 614 Pfam Glycosyl transferases group 1 406 527 IPR001296 GO:0016757
Lja3g1698 614 Gene3D Glycogen Phosphorylase B; 90 580 - -
Lja3g1698 614 PANTHER GRANULE-BOUND STARCH SYNTHASE 1 614 - -
Lja3g1698 614 CDD GT5_Glycogen_synthase_DULL1-like 89 588 - -
Lja3g1698 614 Pfam Starch synthase catalytic domain 90 349 IPR013534 -
Lja3g1698 614 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 75 587 - -
Lja3g1698 614 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 1 614 - -
Lja3g1698 614 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 88 587 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1698 Lja-Chr3 18836176 18840400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1698 1 614 Glycosyltransferase AT1G32900 69.805 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1698 K13679 - gmx:100037476 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1698 3 18836176 18840400 Lja3g1698 3 18836176 18840400 ECH