Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1686 ATGGCCACCACCACCATCACCACTGCCACAAAGTCACCCCTCTTAACCGACTTGGCCTCCACCCTGAACCATGTCCCCTCCAATTTCATCAGGCCCATCAATGACCGTCCAAATGTTCATGAATTTCAATCCTTCTCCGATTCCATTCCTATCATTGACCTCCAAGGTCTAGATGGTTCCAATCGCGAAGAAATCATCCAAAAGATTGCCAACGCTTGCCAAAATTATGGCTTTTTCCAAATTGTGCATCATGGAGTGCCGGAGGAGGTGGTAGGTAACATGGTGAAGGTGTCAAGAGAATTCTTCAGTTTGCCAGAGAGTGAGAGGCTGAAGAATTACTCTGATGACATGTCAAAGACAACCAGGCTTTCCACCAGTTTCAACTTGAAGACTGAGAAGGTTTCCAACTGGAGGGACTACTTGAGACTTCACTGCCATCCTCTTCAGGATTACATTCACGAGTGGCCTGCCAACCCTCCATCTTTCAGAGAGGATGTTGCTGAGTATTGCAAACATGTGAGAGGGTTGTCACTGAAATTGGTTGAGGCCATATCTGAGAGCCTGGGGTTGGAGAGGAATTACATAGACAAAGCACTAGGAAAACATGGGCAGCACATGGCCATTAACTACTACCCTCCATGTCCTGAGCCAGGGCTGACATATGGCCTACCAGCTCATACTGACCCAAATGTCATTACCATTTTGCTGCAAAATGATGTGGCAGGCTTGCAGGTCCTGAAAGATGAGAAATGGGTAACTGTCAATCCTGTTCCTAACACATTCATCGTCAATATTGGGGACCAAATTCAGGTGATAAGCAATGATAAGTACAAGAGTGCCCTTCATCGAGCATTGGTGAACAATGAAAAGGAGAGGATGTCCATTCCCACCTTCTACTGTCCTTCACCGGACGCTTTGATAGGACCAGCTCCCCAACTAATAGACATCGACCATCCTGCTCAATACACAAACTATGCTTACAGTGAATATTACCACAACTTCTGGAACAGAGGACTTTCAAAAACAACTTGCGTGGACATGTTCAAGGCTTCAAACTAG 1059 0.4608 MATTTITTATKSPLLTDLASTLNHVPSNFIRPINDRPNVHEFQSFSDSIPIIDLQGLDGSNREEIIQKIANACQNYGFFQIVHHGVPEEVVGNMVKVSREFFSLPESERLKNYSDDMSKTTRLSTSFNLKTEKVSNWRDYLRLHCHPLQDYIHEWPANPPSFREDVAEYCKHVRGLSLKLVEAISESLGLERNYIDKALGKHGQHMAINYYPPCPEPGLTYGLPAHTDPNVITILLQNDVAGLQVLKDEKWVTVNPVPNTFIVNIGDQIQVISNDKYKSALHRALVNNEKERMSIPTFYCPSPDALIGPAPQLIDIDHPAQYTNYAYSEYYHNFWNRGLSKTTCVDMFKASN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1686 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 157 IPR026992 -
Lja3g1686 352 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 11 344 - -
Lja3g1686 352 Gene3D - 15 338 IPR027443 -
Lja3g1686 352 SUPERFAMILY Clavaminate synthase-like 19 338 - -
Lja3g1686 352 Pfam 2OG-Fe(II) oxygenase superfamily 204 301 IPR044861 -
Lja3g1686 352 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 11 344 - -
Lja3g1686 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 301 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1686 Lja-Chr3 18710856 18714409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1686 10 349 Glycosyltransferase AT5G59530 33.238 6.11e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1686 K24028 - gmx:100788012 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1686 3 18710856 18714409 Lja3g1686 3 18710856 18714409 ECH