Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1676 ATGGGGGGAAAGAGGAAGAAGAACGATGATTCAATCATGGACGACGGGGATGAAGGTTCGAGAAAGAGAACCAAATCAAAGGAACCAAAGCAGAAGGACCAGGTGCTTCCTTCCATGATCAAGAACAAGGAGAAGAGATCGGAGTTGCACGCCAAGCTCAAGCGCCAGAAGAAGCTCGACAAGCGCGCTAAGGCTCAGGCTCGAGATGCTGATGTCAAGCGAGCTCTCGAGCTCGGTGAGGAGCCGCCGGAGAAGAAGGTCCCTCGTACCATTGAGAACACTAGGGAATTGGATGAGACCATTTGCAAGCCTGATGACGAAGAGTTGTTTGCTGGAAATGATGCTGATGAATTCAGTTCAGTTTTGAATAAAAAACAAACTCCCAAGATATTAATCACCACTTGCCGCTTCAACTCTACAAGGGGACCTGCTTTTATATCAGAACTGCTTACGGTTATACCAAATTCACAATATTTGAAGAGAGGAACCTATGATTTAAAAAAGATTGTAGAATATGCAAAGAAAAAGGACTTCACTTCTCTTCTAGTTGTTCACACCAATCGCAGGGAACCAGATGCACTCTTAGTCATTGGCTTACCTGATGGACCTACTGCTCATTTCAAACTCTCAAAGCTTGTTTTACGCAAGGATATTAAGAATCATGGAAAACCAACCAGTCACTTGCCTGAGCTTGTGATGAATAACTTCACAACACGTCTAGGGCACCGAATTGGAAGATTGATACAGTCACTTTTCCCACAAGATCCTGAATTTAAAGGTCGGCGTGTTGTCACCTTCCACAACCAGAGAGACTTCATATTCTTCCGGCACCATCGGTACATTTTTGAAACCAAAGAAGTTAAAAAGACTGAAAAGGACAAGGATGGGAAGAGTAAGAAAGTTCCTGAGCAGGAAACTAATGTCCGTCTTCAGGAATGTGGTCCTCGTTTCACATTGAAGTTGATTAGCCTGCAGCATGGAACATTTGACACTAAAGGTGGAGAATATGAGTGGGTTCACAAGCCGGAAATGGACACCAGCAGGAGGAGGTTTTTCCTATGA 1062 0.4426 MGGKRKKNDDSIMDDGDEGSRKRTKSKEPKQKDQVLPSMIKNKEKRSELHAKLKRQKKLDKRAKAQARDADVKRALELGEEPPEKKVPRTIENTRELDETICKPDDEELFAGNDADEFSSVLNKKQTPKILITTCRFNSTRGPAFISELLTVIPNSQYLKRGTYDLKKIVEYAKKKDFTSLLVVHTNRREPDALLVIGLPDGPTAHFKLSKLVLRKDIKNHGKPTSHLPELVMNNFTTRLGHRIGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKTEKDKDGKSKKVPEQETNVRLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1676 353 SMART Brix_2 131 324 IPR007109 GO:0006364|GO:0019843
Lja3g1676 353 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 30 353 IPR044281 GO:0006364|GO:0042134
Lja3g1676 353 MobiDBLite consensus disorder prediction 1 89 - -
Lja3g1676 353 ProSiteProfiles Brix domain profile. 128 330 IPR007109 GO:0006364|GO:0019843
Lja3g1676 353 Pfam Brix domain 141 322 IPR007109 GO:0006364|GO:0019843
Lja3g1676 353 MobiDBLite consensus disorder prediction 62 89 - -
Lja3g1676 353 PANTHER RIBOSOME PRODUCTION FACTOR 1 30 353 - -
Lja3g1676 353 MobiDBLite consensus disorder prediction 1 49 - -
Lja3g1676 353 SUPERFAMILY Class II aaRS ABD-related 128 327 - -
Lja3g1676 353 Gene3D - 128 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1676 K14846 - gmx:100785331 560.836