Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1674 ATGGGTTTGGATTTCATGGTTTTCATGTTGTTTGTCTTATGGTTTTGTTCGGTTCCTATGTGTGTCTTGGGGGAGAAACAATCTTTCCCACCACTGCAACAGAACCAGAAGCTTCAGTTTGGAGAAAATGGAGAATTCAAGATATTGCAGGTTGCAGACATGCACTATGCAGATGGCAAGACCACACTTTGCTTGGATGTGCTCACTTCCCAGAATGCTACTTGTTCTGACCTTAACACCACTGCTTTCATTCACAGGATGATTCTTGCTGAGAAGCCCGATCTTATTGTCTTCACTGGGGATAATATCTTTGGGTTTGATTCCTCGAATTCGGCTAAATCAATGGATGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTGTTCTAGGCAACCATGACCAGGAAGGATCCCTCTCTAGGGAAGGTGTGATGAAACATATTGTTGGGATGAAAAACACTTTAGCTAAACTCAATCCTGCAGAAGCACACGTCATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTAAAGGCACTGATTTTGAAAATAAATCGGTGCTCAATCTGTACTTTCTAGATAGTGGAGATTATTCCAAAGTTCCTTCAATTCCTGGTTATGATTGGATCAAGCCATCCCAGCAACTTTGGTTCGAGAGAACTTCTGCAAAGCTTCAGAAAGCATACATAAATGGACCAGTTCATCAGAAAAAACCTGCACCTGGTCTTGCATACTTCCACATCCCACTACCGGAATATGCTAGTTTTGACTCATCAAACTTCACAGGTCAGAAACTGGAACCAGATGGCGATGGAATTAGCTCTGCTTCTGTGAACTCTGGCTTCTTCACAACCTTGGTTGCAGCAGGAGATGTGAAGGCAGTTTTCACTGGCCATGATCACCTCAATGACTTCTGCGGGAAGCTAATGGGTATACAACTTTGTTATGCCGGGGGGTTCGGATACCATGCTTATGGAAAAGCTGGATGGCCTAGGAGAGCTAGAGTGGTGGTGGCTAGCTTGGAGAAGACAGACAAAGGCACCTGGGGAGATGTCAACTCAATAAAATCGTGGAAACGCCTCGATGATCAACATCTTACTGGAATTGATGGTGAAGTCCTATGGAGCAAGAGCTTTGGAGCAAACCCTGGCAAATAA 1173 0.4416 MGLDFMVFMLFVLWFCSVPMCVLGEKQSFPPLQQNQKLQFGENGEFKILQVADMHYADGKTTLCLDVLTSQNATCSDLNTTAFIHRMILAEKPDLIVFTGDNIFGFDSSNSAKSMDAAFAPAIASNIPWVAVLGNHDQEGSLSREGVMKHIVGMKNTLAKLNPAEAHVIDGFGNYNLEVGGVKGTDFENKSVLNLYFLDSGDYSKVPSIPGYDWIKPSQQLWFERTSAKLQKAYINGPVHQKKPAPGLAYFHIPLPEYASFDSSNFTGQKLEPDGDGISSASVNSGFFTTLVAAGDVKAVFTGHDHLNDFCGKLMGIQLCYAGGFGYHAYGKAGWPRRARVVVASLEKTDKGTWGDVNSIKSWKRLDDQHLTGIDGEVLWSKSFGANPGK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1674 390 Gene3D - 51 383 IPR029052 -
Lja3g1674 390 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 10 383 - -
Lja3g1674 390 PIRSF Ptase_At2g46880 2 380 IPR011230 -
Lja3g1674 390 PANTHER - 10 383 - -
Lja3g1674 390 SUPERFAMILY Metallo-dependent phosphatases 44 355 IPR029052 -
Lja3g1674 390 Pfam Calcineurin-like phosphoesterase 46 307 IPR004843 GO:0016787
Lja3g1674 390 CDD MPP_Dcr2 44 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1674 Lja-Chr3 18526835 18530061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1674 - - gmx:100794167 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1674 3 18526835 18530061 Lja3g1674 3 18526835 18530061 ECH