Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1660 ATGAGGGAGCCCCGAGATGGAACCAAAACCGATAGAACCTCGAAATCCACACCTTCCCCTGCTTCATTCCCTCTCATTCTCGACATCGATGATTTCAAGGGAGATTTCTCGTTCGATGCGTTGTTCGGGAACCTGGTGAACGAGCTTCTTCCGTCGTTCAAAGTAGAAGCGGAATCGGACGGTGCTGATTCTCTGCCGAATGGCCATATGCGAGCGCCATCGTCCGATGCATCCAAATTCTCCCAAACGGCTTCGAGTCCTCTGTTTCCAGATGTTGAGAAGCTCTTGTCGTTGTTCAAGGATTCTTGTAAGGAGCTGCTTGAGCTTCGTAAACAGATTGATGGGAGACTCTACAATCTTAAGAAAGATGTTTCTGTTCAAGACTCCAAGCATAGGAAGACTCTTGGTGAGCTAGAAAAAGGTGTAGATGGATTGTTTGATAGCTTTGCGAGATTGGATTCACGTATTTCAAGTGTTGGCCAAACAGCTGCTAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCGAGCCAGACAATCGAGTTGATAAAATACTTAATGGAGTTCAATAGCAGCCCAGGCGATCTGATGGAGCTTTCGCCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCCCAAAAATTACGGTCATTTGCTGAGGAAGATATCGGAAGACATGGTATCACAACTGCTGTGGGAAATGCAACTGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATTTACAGGACTACTGCAATGAACTGGAGAATAGATTGCTTTCTCGGTTTGATGCAGCTTCACAAAAAAGAGAATTGACCACCATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGAACAAGTGCCATGCAACATTATGTAGCAACTCGTCCCATGTTTATTGATGTGGAAGTAATGAATGCAGACACTAGGCTGGTTCTTGGTGACCAGGCTGCACAAGCTAGTCCTAGTAATGTTACTCGTGGGCTTTCATCTTTGTACAAAGAAATCACAGACACTGTTCGTAAAGAGGCCGCAACAATCACGGCTGTGTTCCCTTCACCCAGTGAAGTTATGTCGATTTTAGTTCAGCGAGTTTTGGAGCAGCGAATTACTGCCCTTCTGGACAAACTGTTAGTGAAACCATCTCTTGTGAATTTACCTTCTGTGGAGGAAGGTGGACTCCTATTATATCTTCGAATGCTAGCAGTGGCATATGAAAAGACTCAAGAACTAGCCAGAGATCTACGAGCTGTGGGATGTGGTGACTTGGATGTTGAGGGTCTGACAGAGTCCTTGTTCTCAAGTCACAAGGATGAATACCATGAATATGAGCAGGCATCTCTTAGACAATTATATAAAGTGAAGATTGAAGAATTGCGAGCTGAAAGCCAGATTTCTGATTCTTCTGGGACAATTGGACGCTCAAAAGGAGCTTCAGTAGCTTCTTCTCAGCAGCAAATATCTGTCACCGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTTCTTCTCAGCCTGCTACACTGGCAACCAATGTAAAAGCAGTATTTACTTCCCTACTGGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCTAGAGACAGTCTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTCGGTACAAGCGTTAGCCGTAGAGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCTGCTGCTGCTGCTGGTGAAAGCAGTTTCAGATCTTTCATGGTTGCTGTACAACGCTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCAAATTCTATATCTCGGCTTTTGCTCCCTGTGGATGGTGCACATGCTGCTTCTTGTGAGGAAATGGCTACAGCAATGTCCAGTGCAGAGGCTGCTGCTTACAAAGGATTACAACAGTGCATTGAAACTGTCATGGCTGAGGTTGAGCGATTGCTTTCAGCTGAGCAGAAGGCAACAGATTATCGATCACCTGATGACGGAATGGCTCCTGACCACCGGGCAACCACTGCCTGTGCAAGGGTTGTGGCTTATCTTTCTCGTGTGCTGGAGTCTGCTTTCACTGCCCTAGAAGGTCTTAACAAACAAGCATTCCTGTCTGAGTTGGGGAATCGCTTGCACAAGGTGTTGCTAAATCATTGGCAGAAATATACATTTAATCCAAGTGGGGGATTGCGACTGAAACGTGACATTACTGAATATGGAGAATTTGTGCGTAGTTTCAATGCTCCTTCTGTTGATGAGAAATTTGAATTGTTGGGCATAATGGCCAATGTCTTTATTGTCGCTCCCGAGAGCCTTTCAACTTTGTTTGAGGGTACCCCTAGCATTCGGAAAGATGCACAAAGATTTATTCAACTTCGAGAGGACTACAAGAGTGCCAAACTTGCATCTAAACTGAGCTCCTTGTGGGCTTAA 2487 0.452 MREPRDGTKTDRTSKSTPSPASFPLILDIDDFKGDFSFDALFGNLVNELLPSFKVEAESDGADSLPNGHMRAPSSDASKFSQTASSPLFPDVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLGELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGITTAVGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGDQAAQASPSNVTRGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRITALLDKLLVKPSLVNLPSVEEGGLLLYLRMLAVAYEKTQELARDLRAVGCGDLDVEGLTESLFSSHKDEYHEYEQASLRQLYKVKIEELRAESQISDSSGTIGRSKGASVASSQQQISVTVVTEFVRWNEEAISRCNLFSSQPATLATNVKAVFTSLLDQVSQYIADGLERARDSLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAASCEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYRSPDDGMAPDHRATTACARVVAYLSRVLESAFTALEGLNKQAFLSELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYKSAKLASKLSSLWA* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1660 828 Coils Coil 246 266 - -
Lja3g1660 828 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 17 828 - -
Lja3g1660 828 MobiDBLite consensus disorder prediction 60 83 - -
Lja3g1660 828 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g1660 828 PANTHER SEC10 17 828 IPR009976 GO:0005737|GO:0006887
Lja3g1660 828 Gene3D - 661 822 - -
Lja3g1660 828 Pfam Exocyst complex component Sec10 489 822 IPR009976 GO:0005737|GO:0006887
Lja3g1660 828 Pfam Exocyst complex component Sec10 143 473 IPR009976 GO:0005737|GO:0006887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1660 K19984 - gmx:100820430 1413.28