Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1658 ATGCGGAAATCCGCTGCAGACAGATTTAGGCTACTTTTCAACAACGCTCTTGTTCGCTATCGCCATCAACATCACCCTCCTTCATCTTCTTCCTTCTCTCGTTTCTTATCCTCTACTTCAATGGCTTCTGATTCCGTTTTCCCTGTTACCGCCGGTAACATCAACCCTAAGATTGTGGAATGCGAGTATGCTGTTCGAGGAGAGGTTGTCACTCTTGCCCAGAATTTGCAAAAGGAGCTACAGACCAATCCAGGTTCTCATCCATTTGATGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGACAGCAGCCAATAACCTTTTTCCGAGAGGTTCTTGCATTATCTGACTATCCAGCTCTTTTGGACAAAAGTGAAACACAGGGTTTGTTCAGTTCTGACTCAATTGAGCGAGCTTGGCAAATCTTGGATCAGATTCCTGGGAGAGCAACTGGTGCTTATAGTCATAGTCAGGGTATTACAGGGTTGCGCGAAACAATAGCTGCTGGAATTCAAGAGCGTGATGGTTTTCCTTGCGATCCCAGTGACATTTTCTTGACAGATGGTGCAAGTCCAGCAGTCCATCTGATGATGCAATTACTCATAAGATCAGAACAGGACGGTATTCTCTGTCCCATCCCTCAGTATCCTCTGTACTCAGCCTCAATCACACTCCATGGTGGCAGTCTGGTACCTTACTATCTAGATGAAGCTACTGGTTGGGGGTTGGAAATATCTGAACTTAAGAAGCAATTGGAAGATGCCAAGTCCAAAGGCATCAGTGTTAGGGCTTTAGTTGTTATAAACCCTGGCAATCCAACAGGGCAGGTCCTTTCTGAGGAAAATCAACGCGCTATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGACGAGGTATATCAACAAAATATTTATGTTCCTGACAAGCAATTTCACTCTTTCAAGAAAGTATCTCGATCCATGGGATATGGTGACAAAGATATCACCTTAGTATCTTTTCAGTCAATCTCCAAAGGCTATCATGGGGAGTGTGGGAAACGTGGAGGTTATATGGAGGTGACTGGATTTTCTGCAGATGTGAGGGAGCAGATATATAAAGTGGCATCTGTGAATCTCTGCTCTAATATCTCTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCGCCTAAGGTTGGAGATGAGTCCTATGAGTCATTCATGGCTGAGAAGGAAAATATCTTATCCTCCCTTGCTAGGCGTGCAAAGATTCTGGAAGATGGTTTTAACAAATTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCAAATTCGTCTGCCTCAAAAGGCTATCAAAGCTGCAGAGGCTGCAAATACAGCACCTGATGCCTTCTACTGTAAACGCTTGCTTAATGCCACCGGAGTGGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGAACTTGGCATTTTAGGTGCACCATATTGCCTCAAGAAGAAAAGATTCCGGCAATTGTCTCCCGCTTCACCGAGTTCCATGAAAAGTTCATGAACGAGTTTCGTGACTGA 1581 0.4415 MRKSAADRFRLLFNNALVRYRHQHHPPSSSSFSRFLSSTSMASDSVFPVTAGNINPKIVECEYAVRGEVVTLAQNLQKELQTNPGSHPFDEILYCNIGNPQSLGQQPITFFREVLALSDYPALLDKSETQGLFSSDSIERAWQILDQIPGRATGAYSHSQGITGLRETIAAGIQERDGFPCDPSDIFLTDGASPAVHLMMQLLIRSEQDGILCPIPQYPLYSASITLHGGSLVPYYLDEATGWGLEISELKKQLEDAKSKGISVRALVVINPGNPTGQVLSEENQRAIVEFCKKEGLVLLADEVYQQNIYVPDKQFHSFKKVSRSMGYGDKDITLVSFQSISKGYHGECGKRGGYMEVTGFSADVREQIYKVASVNLCSNISGQILASLIMSPPKVGDESYESFMAEKENILSSLARRAKILEDGFNKLEGVTCNKAEGAMYLFPQIRLPQKAIKAAEAANTAPDAFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRFTEFHEKFMNEFRD* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1658 526 CDD AAT_like 139 515 - -
Lja3g1658 526 Pfam Aminotransferase class I and II 151 504 IPR004839 GO:0009058|GO:0030170
Lja3g1658 526 PANTHER ALANINE AMINOTRANSFERASE 41 525 IPR045088 GO:0008483
Lja3g1658 526 Gene3D - 154 400 IPR015421 GO:0003824
Lja3g1658 526 PANTHER ALANINE AMINOTRANSFERASE 2 41 525 - -
Lja3g1658 526 SUPERFAMILY PLP-dependent transferases 53 520 IPR015424 -
Lja3g1658 526 Gene3D - 103 153 - -
Lja3g1658 526 Gene3D Aspartate Aminotransferase, domain 1 53 524 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1658 Lja-Chr3 18309226 18314486 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1658 K00814 - gmx:100127413 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1658 3 18309226 18314486 Lja3g1658 3 18309226 18314486 ECH