Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1657 ATGGACATCCCCAACCACAGATTCTTCCAACCTTCATCTGTATTTCTACCACAAGGGGATTCACCCATTGAGAGCTTGTATGGAAAGATCAAAGGCAACAACAACATCATCAACAACAACCCATTTGCAGATACCTTCTCTGATCCACTTTGCAAGCTCAATCTCAGGGAAACCTCTGAGTTTGTCAAGTCATTTCCAACCTCAAATGGCAATGACTCTGTCTCACAGCAACAGAGGAGGCTAGAGGCTCCTTCAACCCCTGGCAGACCTGTTTTCAGCTTCAGCTCCAGCATTGGAAGAAACCTTTCAAGGAAGAGCTTCCCTTCCAAATGGGATGATGCAGAGAAATGGCTCATGAGCAGCTCCTGCCATGACTCACCTGCTCACAACACCACCTCCAAGATCAGCAGCACCAGACAACAACAATGTGAGGATGGATTTAAGCAGCTGCAGCAGCAAGTGGAGAGTTTCTCGGAGAAATCGAGGGTCACAGAGGAAAGGGTTTCTTCCAAAGCTGTCCCAACCTTCCAAAGGTCTCCATCTTTGGACCACCATCAAGCACTTGGCGCTTTCAATGGTGTCCCATGTCCTACAGACATAGTACTGAAAGATAAGTTCACAGACAGTATAGAGCCAATTATGCCGAATTTCAGATATTCAGAGCCAACTAAAGAAGGGTTTTTGTTTAGAAACCCAGCTGGGGAGGCAATGCAGGATGCTTGTACAGAAGTGGTTCATGAGGTTCAACATAGAGATGTTGGGACAGAAATGACTCCTATAGGAAGTTCCACAACTTCAAGATGCCACACCCCATTCAAGAGTTCATCCCCGGCTCGCCACAACACTCCCGCAAGTAGGTCAGGACCATTGGCCTTGGCTAGCCCCAAAAGCACTGGCTGCACTGTTGATGTGATTCAGCTGGAGGAGTGCCACTTTTCTAAACTGCAGCTAGCGACACCGTATGATTTTGTCCCTTCAAATTGGAGCTCAGGTGAGGAGGAAGATAAGGAAATGTCGAAAAGCTTGAGACATAATGCTAGCCAGAAAGCTGACTCAGACTGCATAGCTGCTACATGGGAAGAGGAGGAGAAGACTAAGTGCTGTCTTAGGTATCAAAGAGAAGAAGCAAAAATCCAAGCTTGGATAAACCTACAAAATGCTAAAGCAGAAGCTCAATCAAGAAAGCTTGAGGTGAAAATTCAGAAGATGAGATCAAACCTGGAAGAGAAGCTGATGAAGAGAATGACAGTGGTTCACAGGAAGGCTGAGGAATGGAGGGAAACAGCTAGAGAAAAGCACATGGAGCAAATGCAGAAAGCCGCTCAACATGCTAAAAAGATGGTCCATGGCCATAACTCACAATTTTCTAGGCACAGTTCATGTGGTTGCTTCCCTTGTAATAACAACCATCATTAA 1416 0.4597 MDIPNHRFFQPSSVFLPQGDSPIESLYGKIKGNNNIINNNPFADTFSDPLCKLNLRETSEFVKSFPTSNGNDSVSQQQRRLEAPSTPGRPVFSFSSSIGRNLSRKSFPSKWDDAEKWLMSSSCHDSPAHNTTSKISSTRQQQCEDGFKQLQQQVESFSEKSRVTEERVSSKAVPTFQRSPSLDHHQALGAFNGVPCPTDIVLKDKFTDSIEPIMPNFRYSEPTKEGFLFRNPAGEAMQDACTEVVHEVQHRDVGTEMTPIGSSTTSRCHTPFKSSSPARHNTPASRSGPLALASPKSTGCTVDVIQLEECHFSKLQLATPYDFVPSNWSSGEEEDKEMSKSLRHNASQKADSDCIAATWEEEEKTKCCLRYQREEAKIQAWINLQNAKAEAQSRKLEVKIQKMRSNLEEKLMKRMTVVHRKAEEWRETAREKHMEQMQKAAQHAKKMVHGHNSQFSRHSSCGCFPCNNNHH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1657 471 MobiDBLite consensus disorder prediction 256 296 - -
Lja3g1657 471 PANTHER OS11G0616300 PROTEIN 1 467 - -
Lja3g1657 471 Coils Coil 386 413 - -
Lja3g1657 471 Pfam Remorin, C-terminal region 356 451 IPR005516 -
Lja3g1657 471 Coils Coil 147 167 - -
Lja3g1657 471 PANTHER OS02G0116800 PROTEIN 1 467 - -
Lja3g1657 471 MobiDBLite consensus disorder prediction 256 294 - -
Lja3g1657 471 MobiDBLite consensus disorder prediction 64 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1657 - - gmx:100776089 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1657 3 18301701 18305094 Lja3g1657 3 18301701 18305094 ECH