Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1653 ATGGATGTAGTAGACAGGACTTTTTTTTCTGAGCTTGTCAGCATCATTAAGTCATGGATTCCCTGGCGATCTGAGCCAGCAAATGTGTCTAGGGATTTTTGGATGCCTGACCACAGTTGTAGAGTATGCTACGAGTGTGATTCCCAGTTCACTATATTTAATCGCAAACACCATTGTCGTCTTTGTGGACGTATTTTCTGTGCCAAGTGTACAACAAATACGGTTCCTGCCCCATTTAGCGGCCAAAGGAATTCTTGGGATGAGTGGGAAAATATTCGTGTATGCAATTATTGTTACAAGCAATGGGAGCAGGGCGTAGTTGTTTTTGACAACAGTAATCAGGTTTCCAATCTGGATCGTAGTAATTCGATGTCATCTTCAAGCTTGGCCAGCAGTAAAACTAGTGGCACTGCTAACAGCAGTAACATCACTCTTTACTCGATGCCTTGTTCAGTTGGGTCTTATCAACAAACGCAACAGGGTTCCTGTCTGAACCTGCATCAGTCACCTATGAGGGGAAATGATAGGGAAGGTTCACCAGCATTAGGAGGGAGGAATGATCATGTAGCAGACCAAGGGGATCCATTAACAAAGCAATATGGGTTTTCAATAAACAGGAGTGATGATGATGAGGATGAGTATGGAGTGTACCGGTCTGATTCAGATATGAGGCATTATCCTCAAGTGAGTAGCTACTATGGACAAACGGAGCTTGAGGAGATAAGCAACATAGATGGATCACGGAAAATCCAGTCTGATGGAGATAACATTAATTCAAAACTCTCTTCAAACTACAGTTTTGACGGACAGGGTTTGGAAGGAACACCAGTTATAGCAAAAAATGAAGATGAACCTGATATTTGTGATGAAAACGAAGCACCTTCCTCATTATATGTTTCAGAGTATGTTGATACCGACCCTGTTGATTTTGAAAACAATGGACTTCTCTGGCTCCCACCTGAACCAGAGGATGAAGAAGATGAACGCGAAGCTATTTTGTTTGATGATGATGATGACCTTGATGGGAATGCCACTGGAGAGTGGGGTTATCTGCGCAATTCGAGCAGTTTTGGAAGTGGGGAGTATCGGCACCGAGATAGGTCAAACGATGAGCAAAAGAAGGTAGTGAAGAATGTAGTGGACAGTCACTTTAGGGCACTGGTATCTCAGCTGTTACAGGTTGAGGACATACCTGTTGAAGACAATGACAAAAATAGTTGGTTGGAAATAATCACATTTCTGTCATGGGAAGCTGCTACTTTATTGAAACCAGATATGAGCAAAGGTGGAGGGATGGACCCAGCTGGTAACGTGAAAGTCAAATGCATAGCATGTGGGAGCCGCGTTGACAGTGCGGTGGTTAAAGGAGTTGTGTGTAAAAAAAATGTGGCTCATCGGCGAATGACATCGAAAGTGGACAAACCTCGTTTGCTGATCCTTGGAGGGGCTCTTGAGTACCAGCGTGTCACCAACCTTTTATCTAGTGTGGATACTCTATTGCAGCAGGAAACGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTGCACACAAGCCAAATGTCCTTTTGGTAGAGAAATCAGTTTCTCGGTATGCACAGGAGTATCTCCTTGCAAAAGACATATCTCTGGTTCTCAATGTCAAGAGATCACTTTTGGAGCGCATAGGGCGTTGCACAGGAACTCAAATAGTGCCTACAATCGATCATCTTTCATCACAGAAGTTAGGTTACTGTGAAACATTTCATGTTGAGAAGTTTCTTGAAGATCTTAGTGCTAGTCAGGGTGAGAGAAAAACAATGAAAACATTGATGTTTTTTGAAGGCTGCCCAAAACCATTAGGTTGCACAATTTTACTTAGAGGAGCTGACAAGGATGAACTGAAGAAGGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTCTGGAGACATCTTTTCTTGCTGACGAAGGAGTCTCCCTGCCAGAAATTCCATTAAACAGCCTTGCACTACCAAATAAATCATCATCCATTCAGAGGTCCATCTCAACAGTTCCTGGTTTCAGTGTTCCTGGCATTGACAAGTCTCAGGGGCATAAATCTGATACTGAACCACGGAGAACCAAAAGTGTCACGATTTCTGATCTAGCCTCATCAGCCCGCGATACAGGGTCCTGTGTGTCTAATGGTACGTCTCAATCTATACCACCTGGATCAAGTCTCAACTCTTCAACTGCCTTGCACGCCTCAATTGCTGCTTCAGGAAATGCAATTCCAGAGTCATATGATAAGAATCTTCGTTCATGCACTAGCAAAGAGAGAAACGAAATGGACTCCAATCAACCTCTAGTGGAAGAAACTTCTGTAGGGGACAACACTCAGGCAATCATGGATGATCCCTCTATAAATGACTCTGAAACTATAGAGAAATTATATCAAGGCATTTTAGCCAACAATCCTCAAAACGGGCATAACAAAATATCTGCAAACCATTTAAGTGGTTCGCAGTCATTATCTCCAAACTTTGTTCAAAACCACCCTATGAAACTTGAAATCAGAAATGAAGAGCCAGTTCCTCAAAAGGAAGAGTTTCCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGTGTATGGAAGGGTACTGTGTGTGAGAGGTCCCATCTATTTCGAATTAAATACTATGGCAGCTTTGACAGACCATTGGGCCGGTTTCTGCGAGACCATTTATTTGACCAGAGTTATCGATGCCCTTCTTGTGAAATGCCATCAGAAGCACATGTGGATTGTTATACTCATCGGCAGGGGACACTCACCATTTCAGTCAAGAAAATACCTGAAATTACCCTACCTGGTGAAAGGGAGGGAAAGATCTGGATGTGGCACAGGTGTTTAAGGTGTCCAAGAACCAATGGTTTTCCTCCTGCTACACAAAGAATAGTAATGTCCGATGCTGCTTGGGGTTTATCATTTGGGAAATTTTTGGAGCTTAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCCTTACACAGAGATTGTCTTCGGTTTTATGGATTTGGAAAAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCATTCAGTCTACCTTCCCCCTCACAAACTGAATTTTGATTACGGGAATCAGGATTGGATACAAAAAGAATCAGATGAGGTGGTCAACCGAGCAGAGCTTTTATTCTCTGAAGTACTCAATGGTCTTAGTCAAATTGGAGAGCAAAGATCAAGTGCAGTGCTCCTCAACAGCGGCCTCAAGACACCTGAATTAAGACGCCAAGTTGCTGAACTGGAGGGCATGTTGCAGAAGGAGAAGCTAGAATTTGAGGAAACTCTTGAAAAGATTTTGAAGCAAGAAAGGAGAAATGGCCAACCTGGGATTGACATTCTAGAAATTAATCGACTGTGGAGGCAGTTACTTTTCCAATCATATATGTGGGACCACCGCCTTGTTTACACAGCCAGCTTAGCTAATTCCAGCAATGAAACTGGTTCAAGCAGTTCAATATCGGAGGATAAGGAAATACCTATTGATGAAAATCAGATGAATATGGTTTCTGTGGCAGGAAGAGAATTCAGTAGTGTTGACTCTATTCGTGGTGATCCAAAGCTGAACAAAAGCCCTAGCCTTGGAGGAGGAGGTGGAGTAGTTGATGGCAAAAGTTCCCAATCTGATGTATTTCATCAAGAAATTGACATGGCCAAAAACAAACATCATGAGAAAGAAGACCAACCTAGTCTTTCAATCAGCAAAAGCATAAGTGACCAATCTGACCGTTTAGAACCTGAATTGGGTGTTCGCAGAGCTCTCTCTGATGGGCCATTTCCTGTCATACCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGAAAACAAATCAGGATTTGGAATTCAAAACGATAACACTTCTTCAAATCCTGATATATTGATGGGAGATTCTTTGGCGACCACTGTACAGAAAGAAACATACATTCTAGGGGATCGCACAGAAGATCAGAATGGCTCCAAGAGTATCAATTCTGCTACTAAAGGTCTTGATAACATGGAAGACTCTTCAAGCTGGTTACGGATGCCCTACTTAAACTTTTATCGCCAGTTTAATAAGAATTTTTTTGCCAGTACGCAGAAGTTTGATACGATAGTTGACTACAATCCTGTTTATGTATCATCCTTCCGGAAGCTGGAACTCCAAGGAGGAGCGAGGCTGCTTCTGCCGATTGGTGTAAATGACACTGTAATTCCAATATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCACCAGAATATCATTTCCAATTGACTGATGAAGGAGAGAGACCAAAAGAAGGATTTGAGTCGTCTTCATCATATTTTTCTGACTCAGGCACCTTCCAGTCATTTTCATCTGCTGATGATACAGCTTTTGATTCTCAGAAAAGTTTTGGGTCGATAGACGAAATGGTGCTGTCCATGTCTGGGTCACGCAGCTCGTCAATGCTGGATCCAGTGTTATATTCAAAGGCTCTGCATGCCAGAGTTTCCTTTGGAGAAGATGGTCCCCTAGGCAAGGTAAAGTATTCAGTGACTTGTTACTATTCCAAGCGATTTGAAGCCTTAAGACGGGTCTGTTGTCATTCGGAGCTTGACTATATAAGGTCTTTGAGTCGCTGTAAGAAATGGAGAGCTCAAGGTGGGAAGAGTAATGTATTCTTCGCAAAAACCTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAGCTTGAATCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGACACAGGAAGTCCAACATGCCTGGCAAAGATTCTCGGCATATACCAGGTTACATCAAAGCATCTTAAGGGAGGGAAAGAATCAAGGATGGATGTCCTGGTCATGGAGAATCTTCTATTTAGGAGGTCCGTGACGCGACTTTATGATCTTAAAGGATCTTCCAGGTCTCGGTATAATCCAGATAGTACCGGGAAAAACAAAGTTCTCCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCTATTTTTGTGGGAAACAAAGCAAAACGGTTATTAGAGAGAGCTGTGTGGAACGACACTGGTTTTCTTGCATCAGTTGATGTAATGGACTATTCTTTACTTGTTGGGGTGGATGAAGAGAAGCATGAGTTAGTTCTTGGAATCATTGATTTCATGAGGCAGTATACTTGGGACAAGCATCTTGAAACATGGGTGAAAGCTTCAGGCCTTCTTGGAGGACCAAAGAACACATCTCCAACAGTTATATCACCCAAGCAGTACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTATTATGCTTCCAGATCAGTGGTCTCCCCCATCTATTATTCCTAGTAATTCTCAGACTGATTTAGGTGAAGACAACACACAGTCTAGGACTGTAGCTGAATGA 5505 0.4247 MDVVDRTFFSELVSIIKSWIPWRSEPANVSRDFWMPDHSCRVCYECDSQFTIFNRKHHCRLCGRIFCAKCTTNTVPAPFSGQRNSWDEWENIRVCNYCYKQWEQGVVVFDNSNQVSNLDRSNSMSSSSLASSKTSGTANSSNITLYSMPCSVGSYQQTQQGSCLNLHQSPMRGNDREGSPALGGRNDHVADQGDPLTKQYGFSINRSDDDEDEYGVYRSDSDMRHYPQVSSYYGQTELEEISNIDGSRKIQSDGDNINSKLSSNYSFDGQGLEGTPVIAKNEDEPDICDENEAPSSLYVSEYVDTDPVDFENNGLLWLPPEPEDEEDEREAILFDDDDDLDGNATGEWGYLRNSSSFGSGEYRHRDRSNDEQKKVVKNVVDSHFRALVSQLLQVEDIPVEDNDKNSWLEIITFLSWEAATLLKPDMSKGGGMDPAGNVKVKCIACGSRVDSAVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQETDHLKMAVAKIAAHKPNVLLVEKSVSRYAQEYLLAKDISLVLNVKRSLLERIGRCTGTQIVPTIDHLSSQKLGYCETFHVEKFLEDLSASQGERKTMKTLMFFEGCPKPLGCTILLRGADKDELKKVKHVVQYGVFAAYHLALETSFLADEGVSLPEIPLNSLALPNKSSSIQRSISTVPGFSVPGIDKSQGHKSDTEPRRTKSVTISDLASSARDTGSCVSNGTSQSIPPGSSLNSSTALHASIAASGNAIPESYDKNLRSCTSKERNEMDSNQPLVEETSVGDNTQAIMDDPSINDSETIEKLYQGILANNPQNGHNKISANHLSGSQSLSPNFVQNHPMKLEIRNEEPVPQKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDRPLGRFLRDHLFDQSYRCPSCEMPSEAHVDCYTHRQGTLTISVKKIPEITLPGEREGKIWMWHRCLRCPRTNGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHKLNFDYGNQDWIQKESDEVVNRAELLFSEVLNGLSQIGEQRSSAVLLNSGLKTPELRRQVAELEGMLQKEKLEFEETLEKILKQERRNGQPGIDILEINRLWRQLLFQSYMWDHRLVYTASLANSSNETGSSSSISEDKEIPIDENQMNMVSVAGREFSSVDSIRGDPKLNKSPSLGGGGGVVDGKSSQSDVFHQEIDMAKNKHHEKEDQPSLSISKSISDQSDRLEPELGVRRALSDGPFPVIPSLSDTLDAKWTGENKSGFGIQNDNTSSNPDILMGDSLATTVQKETYILGDRTEDQNGSKSINSATKGLDNMEDSSSWLRMPYLNFYRQFNKNFFASTQKFDTIVDYNPVYVSSFRKLELQGGARLLLPIGVNDTVIPIYDDEPSSIIAYALMSPEYHFQLTDEGERPKEGFESSSSYFSDSGTFQSFSSADDTAFDSQKSFGSIDEMVLSMSGSRSSSMLDPVLYSKALHARVSFGEDGPLGKVKYSVTCYYSKRFEALRRVCCHSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIDTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRSVTRLYDLKGSSRSRYNPDSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKASGLLGGPKNTSPTVISPKQYKKRFRKAMTTYFIMLPDQWSPPSIIPSNSQTDLGEDNTQSRTVAE* 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1653 1834 SUPERFAMILY SAICAR synthase-like 1535 1801 - -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 1250 1276 - -
Lja3g1653 1834 CDD Fab1_TCP 385 655 - -
Lja3g1653 1834 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1576 1743 IPR002498 GO:0016307|GO:0046488
Lja3g1653 1834 MobiDBLite consensus disorder prediction 686 740 - -
Lja3g1653 1834 CDD FYVE_PIKfyve_Fab1 33 100 - -
Lja3g1653 1834 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1824 - -
Lja3g1653 1834 Coils Coil 1109 1136 - -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 778 799 - -
Lja3g1653 1834 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1477 1801 IPR002498 GO:0016307|GO:0046488
Lja3g1653 1834 SMART fyve_4 29 104 IPR000306 GO:0046872
Lja3g1653 1834 MobiDBLite consensus disorder prediction 119 138 - -
Lja3g1653 1834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 108 IPR013083 -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 766 799 - -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 1174 1194 - -
Lja3g1653 1834 Pfam FYVE zinc finger 34 102 IPR000306 GO:0046872
Lja3g1653 1834 MobiDBLite consensus disorder prediction 1211 1237 - -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 707 740 - -
Lja3g1653 1834 SMART PIPK_2 1511 1802 IPR002498 GO:0016307|GO:0046488
Lja3g1653 1834 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1824 - -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 1813 1834 - -
Lja3g1653 1834 Gene3D - 1660 1802 - -
Lja3g1653 1834 SUPERFAMILY FYVE/PHD zinc finger 32 104 IPR011011 -
Lja3g1653 1834 SUPERFAMILY GroEL apical domain-like 450 621 IPR027409 -
Lja3g1653 1834 Gene3D GroEL 449 621 IPR027409 -
Lja3g1653 1834 MobiDBLite consensus disorder prediction 165 212 - -
Lja3g1653 1834 CDD PIPKc_PIKfyve 1538 1801 IPR044769 GO:0000285
Lja3g1653 1834 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1501 1658 IPR027484 -
Lja3g1653 1834 Pfam TCP-1/cpn60 chaperonin family 391 643 IPR002423 GO:0005524
Lja3g1653 1834 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 37 103 IPR017455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1653 Lja-Chr3 18268055 18278730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1653 2 1834 EF-hand Containing Proteins AT3G14270 59.474 0.0 2063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1653 K00921 - gmx:100819364 2994.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1653 3 18268055 18278730 Lja3g1653 3 18268055 18278730 ECH