Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1652 ATGGGAAAAGTTCATCCCAAAGCATTGCATTCTTCTACTACTTGCCATCTCACTTCCAAGCAAGAGACGTTCACTCTATGGATGAAATCTCTGGTTCTGAATGGAAAGGGATGCACAGTCTTTGATTCAAATGGCCAAATTGCCTATCGAGTTGATAACTACAATTGCAGTCATAGAAATGAAGTTCATCTCATGGATCAAAAAGGCAATGTTTTGTTCACAATACTAAAAAAGCTATGTAAGTTCTCCAGGTTTTGGGAGGGTTACAGATTCCCAGCCACAAAGAATGAGCACAAAGGACCAAGCTTTCGTGTTTACCAAACTCATAGAATCTCCAAAGGGGATTCAACTTGTCAAGTTGAACTTGGATTGGACAAAAATCAATCATATACTTACAAAATAGAAAGCATCACTTGCAAGTCAGCTTGCAAAATAACTGATGAGTTTGGAGTGATGGTTGCAGAGCTAAGGAGAAAGAAGTCAAATTGTGGAGTTGATTTAGGAGATGATGTTTTCACAATGGTTGTGGAGCCAAACAAAGATCTTTCTCTAATCATGGGTCTTGTGGTAACTTACAGCCTCATCAACTATAGAATGTGA 600 0.3867 MGKVHPKALHSSTTCHLTSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNCSHRNEVHLMDQKGNVLFTILKKLCKFSRFWEGYRFPATKNEHKGPSFRVYQTHRISKGDSTCQVELGLDKNQSYTYKIESITCKSACKITDEFGVMVAELRRKKSNCGVDLGDDVFTMVVEPNKDLSLIMGLVVTYSLINYRM* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1652 199 Pfam LURP-one-related 17 190 IPR007612 -
Lja3g1652 199 PANTHER - 3 198 IPR007612 -
Lja3g1652 199 PANTHER PROTEIN LURP-ONE-RELATED 11 3 198 - -
Lja3g1652 199 SUPERFAMILY Tubby C-terminal domain-like 16 196 IPR025659 -
Lja3g1652 199 Gene3D - 13 198 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1652 Lja-Chr3 18259585 18261289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1652 - K03239 gmx:100527543 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1652 3 18259585 18261289 Lja3g1652 3 18259585 18261289 ECH