Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1647 ATGATGCTACCAAAGTTCATGAGCCCCTTCAAGTTCAAGGTGGAATCCCAAGAAGGAAAGATGCTCAACAGAAGAAAAAAGCATGTAATGAGCTCCATTGAGGGTACCACCATGGATGTTGGCCTAAGGCTCCTCCCTCAAATTACCAGCTCAAAGAGCAAATCCAGCAATGTCCTTGTCAAATCTGCAGTGAAAAAGGCAAACCAAACAAGCCCTTCAGAATTTTGCTTCCTTAAAAATTGCAATCTATGCAATAAACAGCTCAGCCCAGACAAAGATATCTACATGTACAGGGGAGATCAAGGTTTTTGCAGTATAGAGTGCAGGGACAGACAAATAGTTTTGGATGAGATGAGAGAATTACAGATCTCTACGAAGCAAATGGTAGCATCTTATGGGCAATGTTGTAATGAGGCACGACGAGAGACTCGCCTTATTCTTGAGGACCTTCGAATGCATAGACATAAATCTAAAGTCTAA 480 0.4188 MMLPKFMSPFKFKVESQEGKMLNRRKKHVMSSIEGTTMDVGLRLLPQITSSKSKSSNVLVKSAVKKANQTSPSEFCFLKNCNLCNKQLSPDKDIYMYRGDQGFCSIECRDRQIVLDEMRELQISTKQMVASYGQCCNEARRETRLILEDLRMHRHKSKV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1647 159 PANTHER FCS-LIKE ZINC FINGER 17 2 157 - -
Lja3g1647 159 ProSiteProfiles Zinc finger FLZ-type profile. 76 120 IPR007650 -
Lja3g1647 159 Pfam zinc-finger of the FCS-type, C2-C2 74 118 IPR007650 -
Lja3g1647 159 PANTHER FCS-LIKE ZINC FINGER 17 2 157 IPR044181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1647 Lja-Chr3 18185833 18187066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1647 - - gmx:100817221 219.935