Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1640 ATGGAGATAGCAAAGGAAAAGCTGCTGCAGACCAGTGGTGCTGTTGTTGCTGCTGCAGATGGAGGAGCTGACCCCAAGTCCTGCTACATGCAGAAGTTCAGGCTCTATGAGACTCGCTCGAACTTCTATATGATTGGAAGAGACAAAAGCAGAACATTTTGGAGGGTCTTGAAGATTAACAGATTGGAGCCATCTGAATTAAACATCACTGAAGATTCAACTGTGTACTCAGAAGTTGAGTGTTGTGACCTTGTGAGGCGGATACATGAAGGAAACAAGCCAACAGGGGGGCTTAAATTTGTAACAAATTGCTATGGAATCATTGGGTTTATCAAATTTCTTGAGCCATACTACATGCTGCTCATAACAAAACGAAGGAAGATTGGCAAAATATGTGGGCATACAATATATGCTATCTCGAAAAGCGAAATGGTTCCCATTCCACATGCAACTGTGCTATCCAAAATGGCACATTCTAAGAATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACAAAGGACTTCTTTTACAGCTACTCATACAATATCATGCTTAGTCTTCAAAAGAACTTAGCTGGTCATAATATTGGACAATCACTTCATGAAACATTGTTTGTTTGGAACGAGTTCTTAACTCGTGGAATCAGGAATAATATCCAGAATACTTCATGGATAGTTCCCTTAGTATATGGCTTTTTTAAACAGGTCAAGCTTTCTATATCTGGCATCGAGTTCGACTTCATCCTCATTGCTAGGCGCTCAAGGCATTATGCTGGGACCAGATATTTGAAACGGGGTGTCAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTGCAGATGCTCATGATGGATCCCCAATGCAAATAAGCTCTGTGGTACAGATCCGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTCCATTGAATATAAAACCTGACATTATATTATCAAGGAAGGACTCTAGTTTTGAAGCCACAAGACTTCATTTTGAAAACCTTGTCAAGAGATATGGAAGTCCAATTATTATATTGAACTTGATTAAGACGCGTGAGAAGAAGCCTCGAGAAACTATTCTGCGAGCTGAGTTTGCTAATGCTGTGAGGTCTATTAATAAAAGTTTGAAGGGGGAAAATCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCACTCAAGAAACAAATCTACCAATGTGTTGGGACAACTGGGAAAAGTGGCTGCATATGCATTGAAGCTAACTGGCATCTTCTACTGTCCAGTGACACCGAGTTTGAAGCAGGATGGATTATTCCAATATTCTTACTCTGAGAATAACAAAGTCATTGATCACTCTGTCACAGAACAAGCTAGGACTGACAAGGATAATATTGATGAGCAGACAGAAACTGGCAATTATCACTATAGTGGCAGTGAGAACAAAGATTACAGCGTCAAACCCCAGATGCTTCAAGCAGGGGTCTTGAGGACTAATTGCATAGATTGTTTAGATCGTACCAATGTTGCACAATATGCTTATGGACTAGCTGCTCTTGGACGTCAGCTACAAGCTCTAGGATTTGTCGAATCTCCTTATATTGATCTCGATAATCCTCTGGCAAGGGAGCTAATGACAGTATATGAGTCCATGGGCGACAAATTAGCCTTTCAATATGGTGGCTCTGCAGCACACAATAAGATATTTTCTGAAAGAAGAGGTCAGTGGAAGGCAGCAGCACAATCCCAGGAACTTATTCGAACCCTCCAGCGTTATTACAACAACACATATTTGGATGGTGATAAACAAAAAGCAATTAATATGTTCTTGGGGCATTTTCAGCCACAGCAGGGAAAACCGGCACTGTGGGAGCTAGACTCAGATCAGCATTACTCTGCTGGGAGTCATAGCTCATATTTATCTGAGGACAATGTCAGACCAACTATTAAAAGATCGCTTTCAGATGGAAACTTTCTCGATGAAAGTGACACTACAATTAGGAACCTGAATGTTGCAGATTATCAGAACTCATCTGAAAACCCTGATAAGTGCGGTCTTTTGGAGTCTAATTCAGACACCTTTACTGGTGGAAGTTCTATTTCTCATTGCAGGCAAATATATGGAGGAATGGCCATGAACCAAGATGGTGAAATTGATCACATTTGTAATGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCATCTTCTGGAAATTCTTGCGAAGAGGAATTACTAGAAAGATCTCATGCAAATACGGGAAGAAATAGTTTGACTTTGGAAGAGATAATAAAGATAGAGGGAAAGCAATTTAACCAGAGCTTAGCAAGCACGCCTAGGTCAGCCAGCATCTCCTCAGATAATATTGAGAGTGAACTAGTTACTGAGGCATCTGCAAGTGGATCTTTATCTAGCGTGAAGGGGAAGCAGCAAAGTGGAACAGAACTGAACAACAAAGATGTCAAGTACCCTGAAAGCTTTGAACGTTGGGTAACTCATGGAGAGTTACTCTTTGTTTGA 2547 0.4122 MEIAKEKLLQTSGAVVAAADGGADPKSCYMQKFRLYETRSNFYMIGRDKSRTFWRVLKINRLEPSELNITEDSTVYSEVECCDLVRRIHEGNKPTGGLKFVTNCYGIIGFIKFLEPYYMLLITKRRKIGKICGHTIYAISKSEMVPIPHATVLSKMAHSKNENRYKKLLCSVDLTKDFFYSYSYNIMLSLQKNLAGHNIGQSLHETLFVWNEFLTRGIRNNIQNTSWIVPLVYGFFKQVKLSISGIEFDFILIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFADAHDGSPMQISSVVQIRGSIPLFWSQEASPLNIKPDIILSRKDSSFEATRLHFENLVKRYGSPIIILNLIKTREKKPRETILRAEFANAVRSINKSLKGENRLRFLHWDLHRHSRNKSTNVLGQLGKVAAYALKLTGIFYCPVTPSLKQDGLFQYSYSENNKVIDHSVTEQARTDKDNIDEQTETGNYHYSGSENKDYSVKPQMLQAGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQALGFVESPYIDLDNPLARELMTVYESMGDKLAFQYGGSAAHNKIFSERRGQWKAAAQSQELIRTLQRYYNNTYLDGDKQKAINMFLGHFQPQQGKPALWELDSDQHYSAGSHSSYLSEDNVRPTIKRSLSDGNFLDESDTTIRNLNVADYQNSSENPDKCGLLESNSDTFTGGSSISHCRQIYGGMAMNQDGEIDHICNDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSHANTGRNSLTLEEIIKIEGKQFNQSLASTPRSASISSDNIESELVTEASASGSLSSVKGKQQSGTELNNKDVKYPESFERWVTHGELLFV* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1640 848 Pfam SacI homology domain 105 402 IPR002013 GO:0016791
Lja3g1640 848 ProSiteProfiles Sac phosphatase domain profile. 169 563 IPR002013 GO:0016791
Lja3g1640 848 MobiDBLite consensus disorder prediction 458 483 - -
Lja3g1640 848 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 9 766 - -
Lja3g1640 848 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 789 848 IPR043573 GO:0043813|GO:0046856
Lja3g1640 848 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 9 766 IPR043573 GO:0043813|GO:0046856
Lja3g1640 848 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 789 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1640 Lja-Chr3 18087710 18097693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1640 30 846 Acyl Lipid Metabolism Gene Families AT5G20840 54.426 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1640 K22913 - gmx:100806380 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1640 3 18087710 18097693 Lja3g1640 3 18087710 18097693 ECH