Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1638 ATGGCGAAAACAAATTCCACCAAACCCTCCCAACCTACAGAAGGGGACGTTGACACTCTCAAATCCGACATCGCCTCTTTCGCTTCTCAGCTTGGCTTGTCCACTTCCCAATCCTATTCAGGTTTCAACGATGTTGATTTTCGCAAAACCAAGCCAAACACTGAGAAAGCCACACCCCAAAATACCCAGAAGCCAAAAAACGATACCAACAGACCCCATGAGCATCCCAACCCCAATTCCAAACCCAAACCCAAACCGAGACCAAGACCAAACCCCCCTGTTGTGTCAGTAGATGATGCCAATAAGGACAAAGGGTTCAACAATTTTAAGAGTCTCCCCAAGCTTCCTTTGATGAAAGCAAGTGTTTTGGGTGTTTGGTTTGAGGAAGCGGTTGAGCTGGAAGCTAAGGTGATTGGGGAGGGGAAGAAGGCGGAGATAAGGAATGTGGGAGAGTGGAAAAGCCTTGTGCAGAAGAAGAAGGAGCTTGGTCAGAGGTTGATGGCACAGTATGCTCAGGATTATGAGGCAACCAGGGGTAAGAGTAGTGATATTAAGATGTTGATTACTACACAGAGGTCAGGGACTGCTGCTGATAAAGTATCTGCGTTCTCTGTATTGGTGGGGGACAACCCGATTGCAAACTTGCGTGCTCTCGATGCTCTTTTGGGAATGGTGACATCCAAGGTTGGAAAGCGCCATGCACTGACAGGTTTTGAAGCACTTCAAGAATTATTTATCGCAAGCTTATTACCAGATCGTAAATTGAAGACCTTGATACAGCGGCCGCTAAATCACATTACTGAAACTAAAGATGGTTACTCCCTTCTACTTTTTTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAGCGGTTTGTTGTTGCACTTGAAGAAGCATCCCGAGACATGCTACCTGCTCTAAAAAGCAAGGCACTAAAGGCCATATATATGCTACTGAGTAGGAAGTCAGAGCAAGAGCGCAAACTACTTTCTGCCCTAGTTAATAAACTTGGGGATCCAGATACTAAAGCAGCATCTAATGCTGACTATCACTTGACCAACCTTTTGTCGGATCACCCGATTATGAAGGCTGTGGTTATTGAAGAGGTGGATTCTTTTCTCTTTCGCCCTCATTTAGGACCACGTTCACAGTACCATACTGTTAACTTCTTGAGCCAAATTCGACTCTCAAATAAAGGAGATGGGCCAAAAGTGGCAAAACGTCTAATAGATGTATATTTTGCTCTGTTTAAGGTTATGATCACTAAGGCAAGCAGCAATGGAAAGTCTGATAAAAGTGGTAAGCCAAATCCAAAAGAAAAAAAATCAAACGAGCTATCAGAATCACATGCAGAATTGGACTCACGGCTTCTATCTGCTCTCCTAACTGGAGTGAATAGAGCCTTTCCTTTTGTTGCAAGTATTGAAGCTGATGAGATTGTTGATGTCCAAACACCTATACTTTTCCAATTGGTTCATTCAAAGAATTTTAATGTAGGAGTTCAAGCACTAATGCTTCTGGATAAAATTTCAGCCAAGAATCAGATAGCCAGTGATCGGTTTTACCGTGCGTTGTACTCCAAACTTTTGCTTCCAGCTGCCATGAATACATCAAAGGCAGAAATGTTTATTGCCCTTCTTCTGAGAGCAATGAAAAGGGATATTAATATAAAGCGTGTGGCTGCATTTTCTAAACGTCTATTACAGATTGCGCTTCAGCAGCCACCACAGTATGCATGTGCGTGCCTTTTCCTTCTTTCTGAGCTCCTTAAAGCCAGACCACCTCTATGGAACATGGTGTTGCAAAATGAGTCTATTGATGAGGAACTTGAACACTTTGAGGATGTTATAGAAGAAACTGATAATGAACCTAATACTGTATCAAACAAACAAATCAATGCCCTTGAGCCTGTTCAGAATGGTGTGGATGCTAATCCTGACACCGGTTATTCAGAAAGTGAAGATGATCTTCCAGCATCTTCTGAAGGTGAAGATTCGGATGATGCTTCTGACGATGCAGATTTTTTACTTGGAGAGAGTGAAATGAATCATGAGAAATCAAAGTCCATATCTGGCAATGAAGGTCATCAATCACAGGAATCTACCAAGAAATCTGTATTGCCTGGAGGCTATGATCCGCGACACAGAGAGCCTTCTTATTGCAATGCAGACCGTGTAAGTTGGTGGGAGTTAATGGTACTTGCTTCACATGCACACCCTTCAGTTGCTACCATGGCCAAAACTCTTCTTTCTGGGGCCAACATTGTGTATAACGGAAATCCATTAAATGACCTGTCATTGACAGCTTTCCTTGACAAATTCATGGAGAAGAAACCAAAACAAAGCACATGGCATGGTGGTTCTCAGATTGAACCTGCCAAACAGATGGATATGAACAACCATTTGATCGGGCCAGAGATTCTTTCACTTGCTGAAGTAGATGTGCCACCAGAGGATCTTGTATTCCACAAATTTTATACAAACAAAATGAAATCTACGAAATCAAAGAAAAAGAAAAAGAAGTCAGCTGATGAGGAGGACGCTGAGGAGCTGTATGATGTTGATGATGGCGAGGTTGAAGGTGGGGACGAGAGTGACAATGAAGAGATTGATGATTTGTTGGATTCTGCTGATCAATCTGTGGAACCATTCGGTGAATATGATTATGATGATTTCGATCAAGTAGCTAATGAGGACGATGAGGACTTGATTGGTGATGTTAGTGATGCAGAGATGGATAAGGATATACTCTCAGATATCGGAGAGGAAGACATAGATGCTCTTCAAAGTGGTGATGAAGGGAGTGATGATGAAGTTGAAGGTAGTGATGATGACAATGATATTCAAATTGGGGATGTTGATGATGCCTCTGATGAGGAAGAGGAGGATCAAGTTAGTAAAAGAAAAAGAAAACGTAAAAGTGGTGGCAAGAGTGCTGCGTCTCCATTTGCAAGTTATGAGGAATTTGAGCATCTAATGGATAATGTTGACCAAAATGAGAAAGCACCTACCCAAAAGAAACAGAAACAGAAACACAAGAAAACAAAAAAATAA 3054 0.4214 MAKTNSTKPSQPTEGDVDTLKSDIASFASQLGLSTSQSYSGFNDVDFRKTKPNTEKATPQNTQKPKNDTNRPHEHPNPNSKPKPKPRPRPNPPVVSVDDANKDKGFNNFKSLPKLPLMKASVLGVWFEEAVELEAKVIGEGKKAEIRNVGEWKSLVQKKKELGQRLMAQYAQDYEATRGKSSDIKMLITTQRSGTAADKVSAFSVLVGDNPIANLRALDALLGMVTSKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHITETKDGYSLLLFWYWEECLKQRYERFVVALEEASRDMLPALKSKALKAIYMLLSRKSEQERKLLSALVNKLGDPDTKAASNADYHLTNLLSDHPIMKAVVIEEVDSFLFRPHLGPRSQYHTVNFLSQIRLSNKGDGPKVAKRLIDVYFALFKVMITKASSNGKSDKSGKPNPKEKKSNELSESHAELDSRLLSALLTGVNRAFPFVASIEADEIVDVQTPILFQLVHSKNFNVGVQALMLLDKISAKNQIASDRFYRALYSKLLLPAAMNTSKAEMFIALLLRAMKRDINIKRVAAFSKRLLQIALQQPPQYACACLFLLSELLKARPPLWNMVLQNESIDEELEHFEDVIEETDNEPNTVSNKQINALEPVQNGVDANPDTGYSESEDDLPASSEGEDSDDASDDADFLLGESEMNHEKSKSISGNEGHQSQESTKKSVLPGGYDPRHREPSYCNADRVSWWELMVLASHAHPSVATMAKTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKQMDMNNHLIGPEILSLAEVDVPPEDLVFHKFYTNKMKSTKSKKKKKKSADEEDAEELYDVDDGEVEGGDESDNEEIDDLLDSADQSVEPFGEYDYDDFDQVANEDDEDLIGDVSDAEMDKDILSDIGEEDIDALQSGDEGSDDEVEGSDDDNDIQIGDVDDASDEEEEDQVSKRKRKRKSGGKSAASPFASYEEFEHLMDNVDQNEKAPTQKKQKQKHKKTKK* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1638 1017 PANTHER CCAAT-BINDING FACTOR-RELATED 15 1007 IPR040155 -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 916 961 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 620 718 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 848 869 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 677 691 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 1 107 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 884 908 - -
Lja3g1638 1017 Pfam CBF/Mak21 family 501 746 IPR005612 -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 835 869 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 67 81 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 426 448 - -
Lja3g1638 1017 Coils Coil 603 623 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 622 638 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 433 448 - -
Lja3g1638 1017 SUPERFAMILY ARM repeat 286 596 IPR016024 -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 990 1005 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 1 44 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 657 675 - -
Lja3g1638 1017 MobiDBLite consensus disorder prediction 882 1017 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1638 K14832 - gmx:100802669 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1638 3 18063723 18071403 Lja3g1638 3 18063723 18071403 ECH