Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1625 ATGGGTTTTCTTCACAAGCTCTGGGACGAAACGCTGGCGGGACCCGCACCTGAAACGGGTCTGGGCAAGCTCCGCAAGTATAATTCTCTTTCCGCCGTCGGAGTTCGGTCTACGGCGGCGGAGGATGTCCCCATCAGCCGCAGCATCACCATTGTTCGCACCCAATCTGGTTTTAGAACTACCTCCTCCGCCGCCTCGGAACCTGCCTCTCCTTCTCCCCCTTTCACCCCTCGCACCCCACGTACCCCGGAGACGCCTGGCGGTGATTTTAAGAAGTTCACGAGGAAAAAATCGTCAGCTGTGGAGAGCGCCGAGCTTAGAAGTCCGACCATTTACGATTGGATAATTATGAGTGCTTTGGATCGTTGTTGA 372 0.5565 MGFLHKLWDETLAGPAPETGLGKLRKYNSLSAVGVRSTAAEDVPISRSITIVRTQSGFRTTSSAASEPASPSPPFTPRTPRTPETPGGDFKKFTRKKSSAVESAELRSPTIYDWIIMSALDRC* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1625 123 Pfam Dormancy/auxin associated protein 7 116 IPR008406 -
Lja3g1625 123 PANTHER DORMANCY-ASSOCIATED PROTEIN HOMOLOG 4 1 116 - -
Lja3g1625 123 MobiDBLite consensus disorder prediction 56 99 - -
Lja3g1625 123 PANTHER DORMANCY-ASSOCIATED PROTEIN 1 1 116 IPR008406 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1625 Lja-Chr3 17963292 17965850 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1625 - - pvu:PHAVU_010G126600g 155.221