Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1605 ATGGCCGATCATTTCTCCAGCCGTGTTGAATTCGGACTCAAGCTCTCGGAGCGAATTTACCCCGGCAAAAGGTCTGCTCCGGCGCCGGCGATGTCCAGGTCGCCGGAGGGATACCTTCCGACGGCGCCGATGTGCTACGCGGTGATATCTGATCCGGAGACGGTGGACAACCCGGACATTAGGAGTTACCAGCCGTACGGTCACGGCCGGTGCGAGCCTCCGGCGCTGATACCGCTTCAGCTTCACGGTGTTGCCATGGAAGTTGAGTGTTGTTTGGATACCGCGTTTGTAACCTTCACCGGAAAGTGGCGCGTGCATTGCGTGAGGGCGAGTAGTTCGTGTGACTGTCAGCTTGCTATTCCCATGGGAGAACAGGGTTCACTTCTAGGTGTCGAGGTTGATGATTCTGGAAGATCTTATCATACTGAATTGATCCCTCTAGAAGATGAAAAGGATAAGCAGAAAGTGGCCAAAGCTAAAGATGGATACTTCTTGAAGAGCCAAATATACACAATCAAGATTCTACAGTTTAAGGGAGGCTCCGTTTTCTCAGTTAAGATCAGATGGTCCCAGAAAATATTATTTCATGATGGCGAATTCTCTCTTAATGTCCCTTTCTGCTTTCCTTCATACGTCATCCCTGTCGGAAGAAAAATTTCTACGAGGGAGAAGATATATTTGAAAGTGAATTCTGGTACAGCAACAGAAGTGTTATGCAAAGCTACAAGTCATCCTCTTAAGGGACTAATACGCCAAGCTGGAAAATTAAGTTTATCATATGAAGCAGAAGTAACTGCTTGGTCAAGCACAGACTTCAGTTTCTCATACACTGTTTCTTCAGGTGACATATTTGGTGGTGTTCTCTTACAATCTCCATTCCTGCGTGATTATGATGAAAGGGAGATATTTTGCTTGTATCTTTACCCTGGAAACAGCCATGATAGAAAGGTTTTTAAAAAGGATGTAGTGTTCATAGTAGATATAAGTGCAAGCATGAAGGGAAGTCCTCTTGAAAGCACAAAGAATGCACTACTGGCATCACTCTCTCAGTTAAACGCACAAGATACATTTAACATTTTGGCTTTCAATGGGGAGGTCTTCTTATTGTCACCGTCGATGGACACAGCTACCCGGGACTCAATTTTAAAAGCTTCTAAGTGGATTGAATCTACTTTTATTGCAAATGGTGGTACGAACATCATGCTTCCATTAACTCAGGCAATAAACCTATTTCGGAAGTCAACCGAATCAGTCCCTCTTATTTTTCTCATTACTGATGGAGCTGTTGAGGATGAGAGAGAGATTTGCAATTTTGTCAAAAGCTATGTCACAAGTGGGCAATCAGTTCGCACACCACGCATATGTACTTTTGGCATAGGTCTATACTGTAATCACTATTTCCTGCAAATGCTAGCGCAAATTGGGAGGGGTCACTATGATGCTGCTCATGATTTAGATTCAATTGACTTTCGAATGCAAAGGCTATTCAGTACTGCTTCATCAGTTATAGTTGCTGACATAACTCTTGATTGTTTAGAAGGTCTTGATTCACTGGAGTTATTCCCAACTCATATTCCAGACCTATCATTTGGAAGTCCGTTGATCATATCAGGCAGATACAATGGAACCATTCCTGAATTAGTTAAGGTTACTGGTGTTCTGGCAGATATGACCAACTTCGAGGTGGACATTAAAGTGAAAAGAGAAAAGGAAATGCAACTCAGTGATGTCTTTTCGAAGAGACATATTGACCTTCTCACTGCTCAAGCCTGGTTGTTAGAAAGTGAAGAGTTGGAGGAGAAGGTTTCAAAGATGAGCATTCAAAATAAAGTCCAGTCAGAGTATACCTGCATGGAGATGGTTTTAATTCAGAGAGATGAAGGGAAGAAGGCACCTGAACCCCTTCTGTTAAAAAAGGCATACAGCACACTTAGCCTCCAGAGGTTGGAACTTGAGAATGCGAAGTTTTTCCTTGGAGGTTTGAGTCTTGGCTTTGGTGACTTGAAAGCAACAACGGAGAACATTCCACCAGCAATAAAAGAAGCAAAACCATCTGAAGGACTATTGGAGAAGGCTGCTTCCAACTGTTGCGGCCGGTTGGCTGATACATGCTGTTGCATGTGTTTCCTACAGAGCTGCTCTTTAGTGAGTGACCGATGCACCATTGTTTGCACTCAACTTTGTGCAGCCCTGGCTTGCTTTGAGTTAATTAAATGCTGTATTGAGGTCTGCGACTGTGATTGCTTGTAA 2250 0.4364 MADHFSSRVEFGLKLSERIYPGKRSAPAPAMSRSPEGYLPTAPMCYAVISDPETVDNPDIRSYQPYGHGRCEPPALIPLQLHGVAMEVECCLDTAFVTFTGKWRVHCVRASSSCDCQLAIPMGEQGSLLGVEVDDSGRSYHTELIPLEDEKDKQKVAKAKDGYFLKSQIYTIKILQFKGGSVFSVKIRWSQKILFHDGEFSLNVPFCFPSYVIPVGRKISTREKIYLKVNSGTATEVLCKATSHPLKGLIRQAGKLSLSYEAEVTAWSSTDFSFSYTVSSGDIFGGVLLQSPFLRDYDEREIFCLYLYPGNSHDRKVFKKDVVFIVDISASMKGSPLESTKNALLASLSQLNAQDTFNILAFNGEVFLLSPSMDTATRDSILKASKWIESTFIANGGTNIMLPLTQAINLFRKSTESVPLIFLITDGAVEDEREICNFVKSYVTSGQSVRTPRICTFGIGLYCNHYFLQMLAQIGRGHYDAAHDLDSIDFRMQRLFSTASSVIVADITLDCLEGLDSLELFPTHIPDLSFGSPLIISGRYNGTIPELVKVTGVLADMTNFEVDIKVKREKEMQLSDVFSKRHIDLLTAQAWLLESEELEEKVSKMSIQNKVQSEYTCMEMVLIQRDEGKKAPEPLLLKKAYSTLSLQRLELENAKFFLGGLSLGFGDLKATTENIPPAIKEAKPSEGLLEKAASNCCGRLADTCCCMCFLQSCSLVSDRCTIVCTQLCAALACFELIKCCIEVCDCDCL* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1605 749 ProSiteProfiles VWFA domain profile. 321 495 IPR002035 -
Lja3g1605 749 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 746 - -
Lja3g1605 749 Pfam von Willebrand factor type A domain 320 479 IPR002035 -
Lja3g1605 749 Gene3D von Willebrand factor, type A domain 319 499 IPR036465 -
Lja3g1605 749 SUPERFAMILY vWA-like 320 489 IPR036465 -
Lja3g1605 749 SMART VWA_4 319 490 IPR002035 -
Lja3g1605 749 PANTHER INTER ALPHA-TRYPSIN INHIBITOR, HEAVY CHAIN-LIKE PROTEIN 1 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1605 Lja-Chr3 17735477 17742660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1605 - - gmx:100807956 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1605 3 17735477 17742660 Lja3g1605 3 17735477 17742660 ECH