Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1604 ATGATCTTCAGGGATAGGAAAATTATGGCGACTGCAACCATGGCCACTGCAGCCGGTGCAGCTGCTCTTTTGTACTACACATTGAACCGGAAATTGCAGAGTCAAAGCACGATCGATGAAGATGATGACGAAAACGACAGTGATGCGCCCACTGATGTGCCGTTAGGTATTGAACGTGTTTCTAATAGGTTAATTCAAGCCCCCGCGACATGGTTGGAGACGATTTCAACATTGTCAGAGACTCTCAGGTTTACATATTCGGAGACATTAGGAAAATGGCCCATCGGGGATTTGGCGTTTGGTATTAGCTTTCTTCTCAAGAGGCAGGGAAACTATCATGTTGACAGTGTGTTTGGTGGTAAGGACAGTGTACAGCTGAAAGGATCTGAGATTACTGCTGAACTCAAGTATCTATTAAACTTATTGACACTGTGTTGGCATTTTTCAAAGAAGCCGTTTCCCTTGTTTTTAGAAGAAACTGGATATACTGAAGAAAATGTTCTCCTTCGGGAGCCAAAAGCAGGAATTTTGAAACCAGCTTTTACAATCATAGCTGATCACAACATGAGGCGCTTCTTGTTATTGATTCGTGGCACACATAGTATCAAGGATACTCTAACCGCTGTTACAGGAAATGTCGTACCTTTTCATCACACTGTAGTTCATCAGGGGGGTGTTAGTGATTTGGTATTAGGTTATGCACATTGTGGAATGGTTGCTGCCGCCCGTTGGATTGCAAAGCTTGCAACTCCTTGTCTCATTGAAGCAATTGGCCGCCACCCTGACTATCAAGTTAAGATTGTTGGGCACTCTTTGGGTGGAGGTACTGCAGCTATTTTAACGTATGTATTAAGAGAGCAAAAGGAACTGTCAGTGACTACATGCGTTACATTTGCTCCAGCTGCTTGTATGACTTGGGAGTTGGCAGAGTCAGGCAATGGTTTTATTACTTCTGTTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTGCTGAGGTGACAGCATCTGCATGGATAAATGACTTGAGGAATCAAATTGAGCAAACAAGAATACTCAGTACTGTCTATCGTTCTGCTTCCGCATTGGGTTCACGCCTTCCATCTATTGCCAGTGCTAGAGCAAAGGTTGCTGGGGCTGGGGCTATTTTGCAACCCGTTTCTAATGGTACCCAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGCCCAAACCTTAACCTGTCCTCTTGGTCATGCATAGGTCCTCGTCGCCGAGCCATGGCTGCTCATTCAAACTCCAGAGATGAAGGAAGTTCCCCTACTTCTGCCTCTGACACTATGGAAAGTTCTGATACACTTCTTTGTTCTCCTAAGAAGGGGATTAATGCCAAGAGCATGAACCTTCCTGTATCTTCATCGGTAGAAGAGTGGTCTTCTGAAATTGAATGTGCTGATGAAAGTAGTCCAGATGATGAGGTGGATGTGGATCTTGATGACGGTGAGAACCTGATGGACCGTGACCGATATGCGGATCAGATGAGTGAAGTAGAGTTGTGGCATCAACTAGAGCATGAGCTCTATGACAGATCTGAAGGTGAGGAGGCTGATGTGGTAAAGGAAATCAGGGAAGAGGAAGCAGCCATACCAGAAGTAGTAGTAGGGCAAAGCCAGAGCTCTGCGCCAGAAATGAAAGAAGTTCACAGATTTTTCCCTCCAGGGAAGATAATGCACATTGTCACACTCCTCTCTGATGCTTCTGAGCATGAAAGTGATAATAGCCCAACCTCCACAAGTTCGGACGATAGTGAGCCAAATGAGACTAAGATTGGGATTTTCTTAACTTCAAGGTCTCTATATAGTAAACTGAGACTTTCACAGACCATGATCAGTGATCACTTCATGCCAGTTTATAGAAGACAGATTGAGAGGCTAATTAAAGAATTTGAGGAAGAATCTGCTGAGGATCAAAGAACACAAGATACGTTGTTATAG 2010 0.4448 MIFRDRKIMATATMATAAGAAALLYYTLNRKLQSQSTIDEDDDENDSDAPTDVPLGIERVSNRLIQAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYHVDSVFGGKDSVQLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREPKAGILKPAFTIIADHNMRRFLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVSDLVLGYAHCGMVAAARWIAKLATPCLIEAIGRHPDYQVKIVGHSLGGGTAAILTYVLREQKELSVTTCVTFAPAACMTWELAESGNGFITSVINGADLVPTFSAASVDDLRAEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIASARAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWTRPNLNLSSWSCIGPRRRAMAAHSNSRDEGSSPTSASDTMESSDTLLCSPKKGINAKSMNLPVSSSVEEWSSEIECADESSPDDEVDVDLDDGENLMDRDRYADQMSEVELWHQLEHELYDRSEGEEADVVKEIREEEAAIPEVVVGQSQSSAPEMKEVHRFFPPGKIMHIVTLLSDASEHESDNSPTSTSSDDSEPNETKIGIFLTSRSLYSKLRLSQTMISDHFMPVYRRQIERLIKEFEEESAEDQRTQDTLL* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1604 669 Gene3D alpha/beta hydrolase 160 367 IPR029058 -
Lja3g1604 669 Coils Coil 644 664 - -
Lja3g1604 669 MobiDBLite consensus disorder prediction 591 612 - -
Lja3g1604 669 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 9 657 - -
Lja3g1604 669 SUPERFAMILY alpha/beta-Hydrolases 152 331 IPR029058 -
Lja3g1604 669 Pfam Lipase (class 3) 194 331 IPR002921 GO:0006629
Lja3g1604 669 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 9 657 - -
Lja3g1604 669 MobiDBLite consensus disorder prediction 438 458 - -
Lja3g1604 669 CDD Lipase_3 186 330 - -
Lja3g1604 669 MobiDBLite consensus disorder prediction 431 458 - -
Lja3g1604 669 Pfam Lipase 3 N-terminal region 59 138 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1604 Lja-Chr3 17716294 17722705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1604 23 657 Acyl Lipid Metabolism Gene Families AT3G14075 65.944 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1604 - - gmx:100807086 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1604 3 17716294 17722705 Lja3g1604 3 17716294 17722705 ECH