Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1599 ATGGGTTCTTCATTGCTAGAGAGATCCTTGTTTACTTCTTCATCTTCTCCCTTACGCAACAGTTTTCACCAGAAGCAGAGCGGGTTCTTGATCACCCCTGCGCAGCTGGTTCCTCTTGATAACAGAAGAGTGGTGAGATTCAGGAAGATTTCCAAGTTCCCTGTTGCTGCTATCAGTGAGGATTTGGTGAAGGGGTCTTCTTCTTCTTCATCTTCCTCATCCTCATCCTCTGCTCCTCTTTCATCATTTTCTTCACCTTCTCCTCTGCCTCCTCCTGTTCCTGAAGACAAACCGGTCAAATTCAAGGTCAGAGCTGTGGTCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAATCAATCGCCAAACAGCTTGATGCTTTAACTGATAGGATTGGCAGGAACGTTGTTCTTGAGCTTTTCAGCACTGAAATTGATCCAAAAACCAAAGCTGCAAAGAAGAGTAAGGAAGCAGTGTTGAAGGATTGGGCAAAGAAATCCAACATCAAAGCAGAGAGAGTAAATTACACAGCTGAATTCATTGTGGACTCCAATTTTGGTGAACCAGGAGCAATTACTGTGATAAACAATCACCAGAAAGAGTTCTTTTTGGAAAATATTACTATTGAAGGATTTGCAAGTGGTGCAGTCCATTTCCCGTGCAACTCGTGGGTTCAAGCAAGAAAAGATCATCCTGGAAAGAGAATTTTCTTTTCTAACAAGCCTTATTTACCTGGAGATACCCCTGCTGGGTTAAGACTATTGAGGGAGAAAGAGCTGAGAAATCTCAGAGGTGATGGCAAAGGAGCTAGAAAATTATCTGACAGAATATATGACTATGAGATATACAATGACTTGGGAAATCCAGATAAAGGAGTTGACCTTGCTAGACCAGTTCTTGGAGGATCTGATATGTATCCATACCCAAGACGGTGTCGCACTGGCCGTGAACCAAGTGATACAGATATGTATTCAGAGAGTCGTGTGGAGAAGCCACAGCCTATGTATGTACCAAGAGATGAACGATTTGAGGAGTCTAAGCAGAACACCTTTGTTGTGAAGAGGCTTAAGGCAGTGCTCCATAGCTTAATTCCGAGCCTTAAGGCGAGCCTTTCTGTTAACAATCAAGACTTCAATGATTTCTCAGATGTTGATGGCCTTTACAGTAAAGGGTTGCTCATTAAGTTGGGGTTACAAGATGACCTTTTGAAGAAACTCCCACCAAAAGTTGTGACCAAGATCCAAGAATCCAGCCAGGGACTTCTTAAATATGATACTCCCTTGATCATACAAAAGGACAGATTTGCCTGGCTGCGAGATGACGAATTTGCCCGCCAAGCCATAGCTGGAGTTAACCCTGTTACCATTGAGAAGCTTGAAGTATTTCCACCTGTTAGCAAGTTAGACCCTGAAGTGTATGGTCCACTAGAGTCTGCTCTTAAAGAAGAGCACATTTTGAGCCAACTTAATGGCATGACTGTTCAAGAGGCAATAGATGAAAATAAGCTGTTCATTGTTGATTATCATGATGTCTACCTTCCATTTCTTGAAAGGATTAATGCCCTGGATGGTAGAAAATCATATGCTACCCGAACCATCTATTACTTGACTCCTCTTGGCACTCTGAAGCCTGTGGCTATAGAACTTAGCTTGCCTCCATCTGGACCAAGTTCGCGATCAAAACGTGTTGTTACCCCTGCTGTAGATGCAACTACTAATTGGACTTGGATGCTTGCCAAGGCCCATGTCTGCTCCAATGATGCTGGGGTGCACCAACTCGTCAACCATTGGTTACGCACACACGCCTGCACGGAACCATTTATATTGGCGGCTCATCGGCATTTGAGTGCTATGCATCCTATTTTCAAGTTATTGGATCCACACATGAGGTACACATTGGAGATCAACGCCTTGGCTCGCCAGAGCTTGATCAATGCGGATGGTATCATTGAGTCTTGCTTCACTCCCGGTCGCTACTGCATGGAGGTTAGTTCTGCCGCTTACAAAAACTTGTGGCGCTTTGACATGGATAGCCTCCCTGCAGATCTCATCCGCAGGGGAATGGCAGTGCCTGACCCAACAGAACCACATGGTCTAAAGCTCACAATGAAAGACTACCCTTATGCAGAAGATGGGATACTAATCTGGTCTGCAATAGAAAATTGGATTCGTACCTATGTGAACTATTACTACCCACATTCAAGCATGATAAGCAATGATAGGGAGCTACAAGCTTGGTACTCTGAGTCAGTGAATGTGGGACATGCTGATAAGAGGCATGAGAGCTGGTGGCCCACATTGAACAACAGTGAGAATCTTGTCTCTGTCCTCTCCATTTTGATCTGGAATGCATCTGCACAGCATGCTGCTCTTAACTTTGGACAGTATCCTTATGGTGGTTATGTGCCTAATCGTCCCCCGATGATGCGAAGATTAATTCCAGAAGAAGGTGACCCTGAATATGCAAGTTTCCTAGCTGACCCTCAGAAGTATTTTCTGAATGCACTGCCTAGTGTGTTGCAGGCTTCAAAATACATGGCTATAATTGACACTCTCTCTACTCACTCACCTGATGAGGAGTACTTGGGAGAGCGGCAGCAGCCATCAGTTTGGTCCGGTGATGCTGATATCGTTGAGGCATTCTACGACTTCTCTGCACAGATCCAGCAGATAGAGAAGGTGATTGATAGTAGGAACTCCGACCGGAATCTAAGGAACCGTTGTGGTGCAGGGGTGTTGCCTTATGAGTTACTTGCACCTAGCTCTGGACCTGGTGTTACATGCAGAGGGGTTCCTAACAGTGTGTCCACATAA 2814 0.4474 MGSSLLERSLFTSSSSPLRNSFHQKQSGFLITPAQLVPLDNRRVVRFRKISKFPVAAISEDLVKGSSSSSSSSSSSSAPLSSFSSPSPLPPPVPEDKPVKFKVRAVVTVRNKIKEDFKESIAKQLDALTDRIGRNVVLELFSTEIDPKTKAAKKSKEAVLKDWAKKSNIKAERVNYTAEFIVDSNFGEPGAITVINNHQKEFFLENITIEGFASGAVHFPCNSWVQARKDHPGKRIFFSNKPYLPGDTPAGLRLLREKELRNLRGDGKGARKLSDRIYDYEIYNDLGNPDKGVDLARPVLGGSDMYPYPRRCRTGREPSDTDMYSESRVEKPQPMYVPRDERFEESKQNTFVVKRLKAVLHSLIPSLKASLSVNNQDFNDFSDVDGLYSKGLLIKLGLQDDLLKKLPPKVVTKIQESSQGLLKYDTPLIIQKDRFAWLRDDEFARQAIAGVNPVTIEKLEVFPPVSKLDPEVYGPLESALKEEHILSQLNGMTVQEAIDENKLFIVDYHDVYLPFLERINALDGRKSYATRTIYYLTPLGTLKPVAIELSLPPSGPSSRSKRVVTPAVDATTNWTWMLAKAHVCSNDAGVHQLVNHWLRTHACTEPFILAAHRHLSAMHPIFKLLDPHMRYTLEINALARQSLINADGIIESCFTPGRYCMEVSSAAYKNLWRFDMDSLPADLIRRGMAVPDPTEPHGLKLTMKDYPYAEDGILIWSAIENWIRTYVNYYYPHSSMISNDRELQAWYSESVNVGHADKRHESWWPTLNNSENLVSVLSILIWNASAQHAALNFGQYPYGGYVPNRPPMMRRLIPEEGDPEYASFLADPQKYFLNALPSVLQASKYMAIIDTLSTHSPDEEYLGERQQPSVWSGDADIVEAFYDFSAQIQQIEKVIDSRNSDRNLRNRCGAGVLPYELLAPSSGPGVTCRGVPNSVST* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1599 937 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 42 936 - -
Lja3g1599 937 SUPERFAMILY Lipoxigenase 245 936 IPR036226 -
Lja3g1599 937 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 101 243 IPR036392 GO:0005515
Lja3g1599 937 Gene3D PLAT/LH2 domain 95 243 - -
Lja3g1599 937 CDD PLAT_LH2 101 240 IPR042057 -
Lja3g1599 937 Gene3D - 347 434 IPR027433 -
Lja3g1599 937 ProSitePatterns Lipoxygenases iron-binding region signature 1. 591 605 IPR020833 GO:0016702|GO:0046872
Lja3g1599 937 MobiDBLite consensus disorder prediction 64 83 - -
Lja3g1599 937 MobiDBLite consensus disorder prediction 307 331 - -
Lja3g1599 937 SMART LH2_4 101 240 IPR001024 GO:0005515
Lja3g1599 937 MobiDBLite consensus disorder prediction 310 331 - -
Lja3g1599 937 MobiDBLite consensus disorder prediction 64 96 - -
Lja3g1599 937 Pfam PLAT/LH2 domain 153 238 IPR001024 GO:0005515
Lja3g1599 937 Gene3D - 435 568 - -
Lja3g1599 937 ProSiteProfiles PLAT domain profile. 115 239 IPR001024 GO:0005515
Lja3g1599 937 Gene3D - 570 936 - -
Lja3g1599 937 PANTHER LIPOXYGENASE 42 936 IPR000907 GO:0016702|GO:0046872
Lja3g1599 937 ProSitePatterns Lipoxygenases iron-binding region signature 2. 618 628 IPR020834 GO:0016702|GO:0046872
Lja3g1599 937 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 242 937 IPR013819 GO:0016702|GO:0046872
Lja3g1599 937 PRINTS Plant lipoxygenase signature 422 438 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 528 552 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 209 227 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 849 863 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 235 256 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 461 480 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 375 396 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 274 290 IPR001246 GO:0016491
Lja3g1599 937 PRINTS Plant lipoxygenase signature 307 326 IPR001246 GO:0016491
Lja3g1599 937 Pfam Lipoxygenase 252 920 IPR013819 GO:0016702|GO:0046872
Lja3g1599 937 Gene3D - 244 346 - -
Lja3g1599 937 PRINTS Lipoxygenase signature 591 608 IPR013819 GO:0016702|GO:0046872
Lja3g1599 937 PRINTS Lipoxygenase signature 573 590 IPR013819 GO:0016702|GO:0046872
Lja3g1599 937 PRINTS Lipoxygenase signature 611 631 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1599 Lja-Chr3 17609584 17615238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1599 1 936 Acyl Lipid Metabolism Gene Families AT1G72520 69.068 0.0 1348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1599 K00454 - gmx:100793614 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1599 3 17609584 17615238 Lja3g1599 3 17609584 17615238 ECH