Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1575 ATGGGTTCTCGAGGAAGGCTATTATTTGATCTCAATGAGCCACCTGCAGAGGATAATGATGAGAGAGATGATGTTGTCCGCTTCCAGCTGCAAAAGACACACCCATCGTCAAATCCCCATACTTCTGACTTACTCGCCGCATCAACTTCTGCCCAAGGAATAGCAAATAATCATGCATTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCTGCTTCTGGCCCTGACACAGATTCTGAAATGGAGAGAGCAGGAGATCAGGATGTAAAGTCTTCCTCTAAGTCTAGTAAAGATGAGGATGTTAAAGTCATGGATTCACGGATATTGAGTTCTGCAAATGCTCAATCTGCTGATAGGGAAGAAGGGGAATGGTCTGATGAGGAGGGCTTAACTGATGCAAATGGAGGTAGTAACTTGCTACAACAAAGTCAATCATCAGAACAGAAAGCAACGTCTGGAATGGTGGATGGGTGTGTTGCATTGGCTTCTGACACTAAGGCTAGCAATGTTATGAGTTATGATACTATAAAAGATGAAAAGAGTACCCATGCTTCAGTAGGTCTAGAATCAAATTCTAGTGGACAGAAAAGCAATGGTATCCCAGATTCACAAAGCAATGTAAAAAATGAAACTTCTACTGATGCGCTGGAGGCACCTAGTGTAGTTCCTAAGCAAAAAGAAGTGAAGGGTATTGAAGCAACTGATGCGACGGAGGCACCCAGTTTAGTTCCCAAGCAAAGAGAAGTGAAGGGTATTGAAGCCAGTCATGCACTCAGGTGTGCAAATAATCTTGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACCATGTTTCTTAACTTGGAAGATGTCAAACAAGCTGGTCCTATTAAAACATCGACCCCTAGAAGGCAGACTTTTGCATCACCTCTTATTAGCCGTACTGTGAAGGAAGTCCGTACTGTTCCTGCACAAGTTGAGCGTGTTGGAATAGCTAAGGATTTAAAACAAATTAATGGATCAAGTGGTGAAGGTGGCACCCAAGCTGAAGTGCATGAACTTAAAACTGATAGTAATGTTGATAATTCTGGACCACTTGGTAGGTCTAAGCGGATATCCAATGAGACAGAACCTCCTACAGAGGTCAATTTACCACCCATTCTGAGACAGGGTTCATGGAAACAACCAACAGATTTGAGGCAGCAAAAGAATGTACTCACTTCCAATAGGAAGTTGGGACTGAGTGGTCAGAACTCCAATGATATCAAGCTCGGAAACAAGAAATTTCCTTCTACCAAGAAACAGACTCCTATCAGTGTCCAGTCCCAGGACACATCTGTTGAACGCCTCATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGGGGAGACTGAGTTACAATGTGTTCCTGGACGGTTTGGATCAGTGGAAGAGTATATTCGAGTATTTGAACCTTTGCTTTTTGAGGAATGTCGGGCTCAACTTTACAGTACATGGGAAGAATCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCAAATGAGTCGAGAGAAAGAGGTTGGTATGATGTGAAAGTCCTTCCAGTACACGAGTTCAGATGGTCATTTAAGGAGGGTGATGTTGCAGTCCTTTCGACCCCCAGGCCTGGATCTGTCAGAGCCAAGCAGAACAGTTCATCTTTAGCTCAGGATGATAGCGAATCAGAAATCACTGGACGTGTGGTGGGTACAGTTAGGCGACACATCCCTCTTGATACCCGGGATCCTCCTGGTGCAATTCTCCATTACTATGTTGGGGACTCCTATGATCCTAGCAGGGTTGATGATGATCATATTGTAAGAAAACTTCAAATTGGAAGCATATGGTACCTCTCAGTGCTTGGATCTCTAGCTACAACGCAGAGGGAGTATATTGCTCTTCACGCATTTCGTCGCTTAAATTCGCAGATGCAAACTGCAATCCTTCAGCCTAGTCCTGAACACTTCCCAAAATATGAGCAACAGGCCCCAGCCATGCCTGAATGCTTCACGCCAAACTTTGTTGAATATCTGCACAGAACCTTCAATGAACCCCAGTTAGCAGCAATCCAATGGGCAGCTATGCATACAGCTGCTGGTACTAGTGGGGCAACAAAGAGGCAAGATCCTTGGCCCTTTACCCTGGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTATGGGGGATGTTGAATGTTATTCACCTTGTGCAGTATCAACACTACTACTCCTCTTTGCTTAAGCATGTAGCTCCTGAAAGCTACAAACAAGCTAATGAGATCAATTCAGAGAGTGCCCCCACAGGATCTATTGATGAAGTTCTTCAAAACATGGACAGAAATCTCTTACGAACTTTGCCTAAACTTGTCCCTAAACCTAGAATGTTAGTTTGTGCTCCTTCTAATGCTGCCACTGATGAGCTTCTTTCCCGTGTCCTTGATCGTGGATTTATTGATGGAGAGATGAAAGTATATCGGCCTGATGTAGCTCGAGTTGGGGTTGATTCTCAGACGCGTGCTGCCCAAGCAGTTTCTGTTGAGCGGAGAACTGAACAGCTTCTTCTCAAGACTCATGATGAGGTTGCGGGATGGATGCATCAGTTAAAGACCCGTGAAATACAAATGACTCAGCAGTTACAATGTCTTCATAGAGAACTAAATGCTGCTGCTGCTGCTGTTCGTTCCCAAGGAGCTGTTGGTGTTGACCCTGACGTTCTGATGGCCCGAGATCAGAATCGAGATGCTTTGCTACAGAACATTGCATCTATAGTTGAAAGCAGGGACAAGATTCTGGTTGAGATGTCTCGCCTTGGCGTTTTGGAAGGCAAGTTTCGACCTGGTAGTGGTTTCAACTTGGAAGAAGCTCGTGCAACTTTGGAAGCTAGTTTTGCCAATGAAGCTGAAATAGTTTTCACAACAGTTTCTAGCAGTGGCCGCAAGTTGTTTTCTCGTCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGGAGTTCTGCCTCCCCTCTCTCTTGGTGCAGCACGGTGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATCAGCAAGGCTGCAGGAACATTGATGTATAGTAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGATGCCCAACAATGTTGTTGTCTGTGCAATATAGAATGCATCCCCAAATTCGGGATTTCCCTTCTAGGTACTTTTATCAGGGGCGCCTTACTGACAGTGAAAGTGTAGTTAAATTGCCTGATGAACCATACTACAAGGACCCTTTACTTAGACCTTATTTATTCTATGATATCAGACATGGGCGGGAGTCTCACAGAGGTGGATCTGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCCGGTTGTATGAGCATGTTCAGAAATCAGTGAAATCTTTGGGTTTAGCGAAGATTACTGTTGGCATAATTACTCCTTACAAGCTGCAGTTAAAATGCCTCCAACGTGAGTTTGAAGAAGTCTTAAATTCAGAAGAAGGGAAGGACATATATATCAATACAGTAGATGCTTTCCAAGGTCAAGAACGAGATATCATTATAATGTCTTGTGTGCGTGCATCCAGTCATGGGGTTGGCTTTGTTGCAGATATACGTCGAATGAACGTTGCCCTTACTCGTGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCAAGTGCTCTGGTTCAATCTGAAGATTGGGCTGCTTTGATTGCTGATGCCAAATCCCGAAAATGCTATATGGAAATGGACTCTCTTCCTAAGGAATTTCTGGCGCCCAAGGGACCTGTTCACGCACCATTGCCTGGTAAGGTTTCATCGAATATGAGGGGCTTGAGATCAGCTGGACCAAGATATAGACCAATGGACATGAATATGGAGTACAGGTCTGATGACGATGAGAAGATGAGTGCTTTAGTAAGCTCCCGGAATGGAAACCACCGTCCTTCAAGGTATTCAATGGAGAATTCCTTAGATGATTTTGATCGTTTGGGTGATAAATCCAGAGATGCCTGGCAGCATGGCATGCAGAGGAAGAACTCAACTGGAAACCTGGGGAAAAGAGATGTATAG 4170 0.4444 MGSRGRLLFDLNEPPAEDNDERDDVVRFQLQKTHPSSNPHTSDLLAASTSAQGIANNHAFSHASSVSGFQPFVRPKSASGPDTDSEMERAGDQDVKSSSKSSKDEDVKVMDSRILSSANAQSADREEGEWSDEEGLTDANGGSNLLQQSQSSEQKATSGMVDGCVALASDTKASNVMSYDTIKDEKSTHASVGLESNSSGQKSNGIPDSQSNVKNETSTDALEAPSVVPKQKEVKGIEATDATEAPSLVPKQREVKGIEASHALRCANNLGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFASPLISRTVKEVRTVPAQVERVGIAKDLKQINGSSGEGGTQAEVHELKTDSNVDNSGPLGRSKRISNETEPPTEVNLPPILRQGSWKQPTDLRQQKNVLTSNRKLGLSGQNSNDIKLGNKKFPSTKKQTPISVQSQDTSVERLIREVTSEKFWHHPGETELQCVPGRFGSVEEYIRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFRWSFKEGDVAVLSTPRPGSVRAKQNSSSLAQDDSESEITGRVVGTVRRHIPLDTRDPPGAILHYYVGDSYDPSRVDDDHIVRKLQIGSIWYLSVLGSLATTQREYIALHAFRRLNSQMQTAILQPSPEHFPKYEQQAPAMPECFTPNFVEYLHRTFNEPQLAAIQWAAMHTAAGTSGATKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYSSLLKHVAPESYKQANEINSESAPTGSIDEVLQNMDRNLLRTLPKLVPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLLKTHDEVAGWMHQLKTREIQMTQQLQCLHRELNAAAAAVRSQGAVGVDPDVLMARDQNRDALLQNIASIVESRDKILVEMSRLGVLEGKFRPGSGFNLEEARATLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVVKLPDEPYYKDPLLRPYLFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKSVKSLGLAKITVGIITPYKLQLKCLQREFEEVLNSEEGKDIYINTVDAFQGQERDIIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSEDWAALIADAKSRKCYMEMDSLPKEFLAPKGPVHAPLPGKVSSNMRGLRSAGPRYRPMDMNMEYRSDDDEKMSALVSSRNGNHRPSRYSMENSLDDFDRLGDKSRDAWQHGMQRKNSTGNLGKRDV* 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1575 1389 MobiDBLite consensus disorder prediction 11 29 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 565 582 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 185 250 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 1352 1373 - -
Lja3g1575 1389 CDD SF1_C_Upf1 1085 1274 IPR041679 -
Lja3g1575 1389 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1347 IPR045055 -
Lja3g1575 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 702 1286 IPR027417 -
Lja3g1575 1389 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1347 - -
Lja3g1575 1389 CDD DEXXQc_SETX 703 1084 - -
Lja3g1575 1389 Pfam AAA domain 1061 1257 IPR041679 -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 191 224 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 81 111 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 1300 1389 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 360 452 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 402 452 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 66 159 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 562 583 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 1 49 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 1323 1337 - -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 137 158 - -
Lja3g1575 1389 Pfam AAA domain 709 1054 IPR041677 GO:0004386
Lja3g1575 1389 Gene3D - 637 1082 IPR027417 -
Lja3g1575 1389 MobiDBLite consensus disorder prediction 30 49 - -
Lja3g1575 1389 Gene3D - 1083 1288 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1575 Lja-Chr3 17266372 17274111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1575 - K10706 gmx:100794516 2290.38