Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1574 ATGGATGGTGATATATTTGGAGAACTAGGTAATACAAGTCAAGTAGATAGCAGAGTTATGCAGGTATTTCAGAAGAGCTTATTGCAAGCCCAAGATATTTTGAATCAGAACCGGGTGCTGATCAATGAGATAAACCAAAATCATGAGTCCAAGATGCCTGATAATCTGAGTCGAAATGTGGGTTTGATTAAGGAGCTCAATAGCAACATCAGAAGGGTGGTTGATCTCTATGCTGATATCTCTAGTTCTTTTACCAAGTCCCAGGAAGCTTCATCTGAAGGGGACTCCAGTGGGACTCTGAAGTCTGATGGAAAAGTCAATCAGAAGAGAATTAGATCCGGCTAA 345 0.4087 MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNVGLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIRSG* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1574 114 PANTHER PROTEIN ELF4-LIKE 4 1 113 IPR040462 GO:0042753
Lja3g1574 114 PANTHER PROTEIN ELF4-LIKE 3 1 113 - -
Lja3g1574 114 MobiDBLite consensus disorder prediction 84 104 - -
Lja3g1574 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Lja3g1574 114 MobiDBLite consensus disorder prediction 84 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1574 Lja-Chr3 17260640 17262207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1574 - - gmx:100305734 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1574 3 17260640 17262207 Lja3g1574 3 17260640 17262207 ECH