Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1569 ATGAGTTTTCTGTTCGGCAGTAGAAAAACTCCAGCAGAGCTTTTGAGGGAGAATAAAAGGATGCTAGATAAGTCCATTAGAGAAATTAAAAGAGAAAGACAAGGCTTGCAGAATCAAGAAAAGAAGTTGATTGTAGAGATCAAGAAGAATGCTAAACAAGGACAGATGGGGGCGGTGAGAGTGATGGCCAAGGATCTTATCCGAACTCGCCATCAGATTGAAAAGTTTTACAAGCTTAAATCCCAACTCCAGGGTGTTTCTTTGAGAATTCAGACTCTAAAATCTACCCAAGCGATGGGAGAGGCTATGAAAGGAGTAACTAAGGCAATGGGTCAAATGAATAGGAGGATGAATTTGCCTTCCTTACAGAAGATAATGCAAGAGTTTGAACGGCAGAATGAGAAGATGGAACTGGTGTCTGAGGTGATGGGAGATGCAATTGATGATGCTCTGGAAGGTGATGAAGAGGAGGAAGAGACAGACGAGCTTGTCAATCAGGTTCTTGATGAGATTGGAATTGATATCAACTCTGAGCTTTTGCATACCCCTGCATCAACCTCGGTTGCTGCACCAGCCGCAAAGAGCAAGGTTGCTCAAGCTGAACCAACAGGCAATGACGACAGTGGAATAGATGATGATCTACAAGCTAGGTTAGATAACCTGAGAAAAATGTAA 675 0.4267 MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRMNLPSLQKIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDINSELLHTPASTSVAAPAAKSKVAQAEPTGNDDSGIDDDLQARLDNLRKM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1569 224 MobiDBLite consensus disorder prediction 184 224 - -
Lja3g1569 224 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 224 - -
Lja3g1569 224 MobiDBLite consensus disorder prediction 210 224 - -
Lja3g1569 224 Gene3D - 6 179 - -
Lja3g1569 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 224 IPR005024 GO:0007034
Lja3g1569 224 Coils Coil 12 46 - -
Lja3g1569 224 Coils Coil 119 139 - -
Lja3g1569 224 Pfam Snf7 17 191 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1569 Lja-Chr3 17231362 17234775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1569 K12191 - nnu:104609351 352.443