LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g1563	ATGGTCCCTGCTTCGCGAACCGAAGGTGGCACTGGAACCAACGCACTCTCTGCCAAGGTGAGAAAAACCATCCAATCCATCAAGGAAATCGTTGGGAATCATTCCGATGCTGATATCTATGTCGCCCTCAAGGAAACCAACATGGATCCTAATGAAACCACTCAGAAATTGCTTAACCAAGATACATTCCATGAGGTGAAGAGAAGGAGGGACCGAAAGAAGGAGACTCAGAATGTTGAGAACAAGGTTTCAGCTGAACCACGGAAGAATGTTGAGAACAAGGTTTCAGCTGAACCACAGAAGAATGTTGAGAACAAGGTTTCAGCTGAACCACGGAAGAATGCTGAGAACAAGGTTTCAGCTGAACCATGGAAGCATTCTGAGAATGGTGGTCAAGGAATGAAAGTTCATACCCCTTATGAACGTAATGTTCGAAAAACAAACTATTCTCGCAATACTTTACCTGGCGTCAGCAGAGAGTTTCGTGTTGTCCGAGACAACAGAGTAAATCAAATATATAGAGAAGTAAAGCCTCCTTCACTGCAACATTCAACGTCAACGATTGAGCAATCAACAGTGAGCACATCTGAAAAGGGCTCATCAGCCCACGCCAATCAAAGTTCATCTGGTGCTAGGAATTCTCAGGCTCCAAATGGTCCTTCTGACGCACACACTGGGCAGTCAAAAGATGCAGTTTCTAATGTCAAGAAAATTACTTCTGAGGAGAAGCAAGGTGTGATTTTGAATGCTGCCGCACGAGTGCAACCAATTAAGCCTAATAAGACCCATCTAAATTCTTCCACAATGGTATCAACCAGTTCTGCTATTGGGGTGTATTCCTCTTCAACGGATCCAGTTCACGTTCCCTCTCCGAATTCCAGATCATCGGGTGTTGTTGGAGCAATTAAGCGTGAAGTTGGGGTGGTTGGTGTTGCTCAGCGGCAGTCTTCAGACAACAAAGCGAAGCAATCTTTTGTTCCCAGTAGTTCTAATTCTAATTCTCTTATTGGAAAAGATGGTACATCTGCAAATTCATTTCAATCAATTGGCGTCATCTCAAAGAGGGAACAATTGAGTCAAACTAATGTAACTGAACCCTCATTCCCTGGCATTCCAGTTGGCAGACCAACCTTTAACAATCAGTATAATAGTAGGCCGCATCAACAACTCGCGGGACATCAGAGAGTTTCCCAGCATAATAAAGAGTGGAAACCTAAATCAAGCCAGAAGACAAGCAACAGTCCTGGAGTGATTGGAACACCTAAAAAATCTGCTTCACCTCCAGCAGAAAATTCTGAACATAAAGAATCAGATATAGCAGAGCTTCAAGATAAACTTTCCCAAGCAAATATATTTGAGAACCAAAATGTGATCATAGCACAACATATCCGAGTTCCAGAGACTGATCGGTGTCGACTGACCTTTGGTACCATTGGGACAGAACGTGATTCTTTGATGGAGCAATCTAAGGATCAATTAATACAAGCTAGCGAAATGTCAAATGTGGAATCAACTCCAAGCTTGACAGTACCTGCTCAAGAGTTGTCCGCTGACGATGTTTCTAGGAGCAAGCAGGTGGATCTACGGGATGATCATATCAGAAGTTCTGGGTCGGACTCTCCAGCATCTGCGACTGCTGCTGAGCAACATTTGCCTGATAACAAAGAATCCTCAAACCCACAGATTCTTGATACTTATGTCAATATTGGATTGGTGCGTGATAGTAGTCCGTCTTATGCACCTTCTGAGCCACAGCAGCACAATTCTCATGACATGCCAGGCTTCTCGGCATATGACCCTCCAACTGGTTATGACATTCCTTATTTCAGACCCACAATGGATGAATCTGTAAGAGGACAGGTTCTGTCTCCCCAGGAGGGTTTGAGCTCTCATGCATCACACAATATTCCCGCGTCCTCAATTTCCATGGTGCAACAACAGCAACCTCCAGTGGCACAGATGTATCCACAAGTTCATGTTTCACATTATGCTAACCTTATGCCATATCGGCAGTTTCTGTCCCCAGTCTACGTTCCACCTATGGGTATGCCAGGATATTCAAATAGTGCTCCCTATCCTCATCCAGCAAATGGCAGTAGTTACTTGATGATGCCGGGAGGGGGTTCTCATCTTAATGCCAACAGCCTTAAATATGGAGTTCAGCAGTTCAAACCTGTTCCTGCCGGAAGTCCTACAGGATTTGGAAATTTTGCTAATCCAACTGGGTATGCCATGATAGCTCCAGGTGTGGTCGGGGGTGCAACGACTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAATCCTCAGGCTGAGACATCAGAAATCTGGTTGCAGAATCCAAGGGATCATCCCGGTGTGCAATCTACTCCATACTATAACATGCCCGGGCAAACCCCTCATGGTGCTTACATGGCTTCACACACTGGTCATGCTTCCTTCAATGCAGCAGCTGCAGCTCAGTCTTCTCACATGCAGTTCCCTGGCATGTATCACACTCCTCCACAGCCAGGTGCTATGGCTGCTAGTCCTCACCATTTGGGACCAGCAATTGGCAACAATGTTGGAGTTGGGGTGGCCGCAGCTGCTCCTGGAGCACAGGTTGGTGCATATCAGCAGCCCCAATTGGGTCACCTCAATTGGACAACAAATTTCTGA	2673	0.4534	MVPASRTEGGTGTNALSAKVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDTFHEVKRRRDRKKETQNVENKVSAEPRKNVENKVSAEPQKNVENKVSAEPRKNAENKVSAEPWKHSENGGQGMKVHTPYERNVRKTNYSRNTLPGVSREFRVVRDNRVNQIYREVKPPSLQHSTSTIEQSTVSTSEKGSSAHANQSSSGARNSQAPNGPSDAHTGQSKDAVSNVKKITSEEKQGVILNAAARVQPIKPNKTHLNSSTMVSTSSAIGVYSSSTDPVHVPSPNSRSSGVVGAIKREVGVVGVAQRQSSDNKAKQSFVPSSSNSNSLIGKDGTSANSFQSIGVISKREQLSQTNVTEPSFPGIPVGRPTFNNQYNSRPHQQLAGHQRVSQHNKEWKPKSSQKTSNSPGVIGTPKKSASPPAENSEHKESDIAELQDKLSQANIFENQNVIIAQHIRVPETDRCRLTFGTIGTERDSLMEQSKDQLIQASEMSNVESTPSLTVPAQELSADDVSRSKQVDLRDDHIRSSGSDSPASATAAEQHLPDNKESSNPQILDTYVNIGLVRDSSPSYAPSEPQQHNSHDMPGFSAYDPPTGYDIPYFRPTMDESVRGQVLSPQEGLSSHASHNIPASSISMVQQQQPPVAQMYPQVHVSHYANLMPYRQFLSPVYVPPMGMPGYSNSAPYPHPANGSSYLMMPGGGSHLNANSLKYGVQQFKPVPAGSPTGFGNFANPTGYAMIAPGVVGGATTLEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDHPGVQSTPYYNMPGQTPHGAYMASHTGHASFNAAAAAQSSHMQFPGMYHTPPQPGAMAASPHHLGPAIGNNVGVGVAAAAPGAQVGAYQQPQLGHLNWTTNF*	891

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	61	95	-	-
	Lja3g1563	890	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	890	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	51	136	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	573	597	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	311	340	-	-
	Lja3g1563	890	Pfam	GBF-interacting protein 1 N-terminal	18	75	IPR009719	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	174	234	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	499	561	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	357	438	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	177	234	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	499	519	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	578	592	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	537	561	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	520	536	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	105	123	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	374	396	-	-
	Lja3g1563	890	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	890	-	-
	Lja3g1563	890	MobiDBLite	consensus disorder prediction	312	340	-	-
	Lja3g1563	890	SUPERFAMILY	UBA-like	18	77	IPR009060	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g1563	Lja-Chr3	17147384	17157101	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g1563	-		-	gmx:100807606	1285.01

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja3g1563	3	17147384	17157101	Lja3g1563	3	17147384	17157101	ECH