Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1559 ATGTCTTTGATTCGGCGCAGAAAAGGGTCGGAAACCGATAAGGGGCAGGGTCAGAGTTTGGAATCGAAGGTGGAAGGTGAGAGAACCGAGAAAGAGGGAGATGATAAGAACAACAAGAGGAAGAAGACGAAGCAGGAAGTGGGGGAGGTGAAGAAGAAGAAGAGAAGGTGGTCGTGTATTGATAACTGTTGCTGGTTTGTGGGGTGCATTTGCACGGTGTGGTGGTTTTTGCTGTTTCTGTATAAGATGATGCCTGCTTCGTTTCCTCAGTATGTGACAGAGGCGATTACGGGGCCTATGCCGGACCCGCCGGGCCTTAAACTTAAGAAGGAGGGGCTCACTGTGAAGCATCCGGTGGTTTTTGTGCCTGGGATTGTGACTGGTGGGCTTGAGTTATGGGAGGGTCATCAGTGTGCAGAGGGATTGTTCAGAAAGCGCTTGTGGGGTGGTACCTTTGGAGAAGTCTACAAAAGACCTTCTTGCTGGGCGGAGCACATGTCATTGGACAATGAAACAGGAATGGATCCACCTGGCATAAGAGTGAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTGCAGGATACTTCGTGTGGGCGGTACTGATTGCTAACTTGGCACGCATTGGTTATGAAGAAAAAACTATGTTCATGGCTGCATATGATTGGAGAATATCATTTCAGAACACTGAGGTGCGAGATCAAACACTAAGTCGGTTAAAAAGCAACATAGAACTTATGGTTGCCACGAATGGCGGGAATAAGGCAGTTATTATTCCACATTCAATGGGTGCCTTGTACTTCCTTCACTTTATGAAGTGGGTTGAAGCACCAGCTCCAATGGGTGGTGGGGGAGGACCACATTGGTGTTCCAAATATATAAAGGCAGTTGTAAACATTGGTGGGCCATTTTTAGGTGTTCCTAAGGCTATATCAGGGCTTTTCTCAGCTGAAGCCAGGGATATTGCTGTTGCCAGGGCGATAGCACCAGGATTTTTAGATAATGATGTGTTTCGCCTTCAAACCTTGCAACATGTCATGAAGATGACCCGCACTTGGGATTCAACAATGTCAATGATACCAAAAGGAGGGCACACTATATGGGGTGGTCTTGATTGGTCACCAGAGGAAGGCTATCTTCCTAACAAGAATAAGCAAAGCACTGACAATACTCAGCCGACAGGTCAAGATAGAAATAAAACAAAAGTTCCCAACTATGGAAGAATGATATCGTTTGGAAGAGATGTGGCAGAGGCCCATTCCTCTGAGATTGAGATGACTGACTTTCGGGGTGCCATTAAGGGTCTCAATGTAGCAAATTCCTCTTGTCGTGATGCGTGGACTGAATACCATGACATGGGAGTTGAGGGAGTAAGAGCTGTTGCTGACCATAAAGTTTTCACAGCTGACGCAATCATAGACTTGCTTGATTTCGTTGCTCCAAAAATGATGGCTCGTGGTAGTGCTCATTTTTCTTATGGCGTAGCTGACAATTTGGATGATCCTAAATATGAACACTACAAATATTGGTCGAATCCCTTGGAGTCAAAGTTGCCAAATGCTCCTGATATGGAAATCTTCTCTTTGTATGGAGTTGGCTTACAAACCGAAAGAGCTTATATTTACAAGTTATCTCCCTATGCTGATTGTTACATTCCCTTTGAAATTGATACCACAGCAGATGGTGATGATGAAGATAGCTGTCTGAAGGATGGAGTGTACACTGTTGATGGTGATGAGACTGTGCCGGTTCTAAGTTCTGGCTTCATGTGTGCTAAAGGTTGGCGCGGGAAAACAAGATTCAACCCTTCTGGGATCCACACTTATGTAAGAGAATATGACCATTCTCCTCCAGCCAACTTTCTGGAGGGCCGGGGTACACAAAGTGGTGCTCATGTTGATATTATGGGAAACTTTGCATTGATTGAGGATGTTATAAGGATTGCAGCTGGGGCAAAAGGAGAAGATTTGGGAGGTGATAGGGTGTATTCTGATATCTTTAAATGGTCTGAGAAAATCAAATTACCTTTGTGA 2037 0.4516 MSLIRRRKGSETDKGQGQSLESKVEGERTEKEGDDKNNKRKKTKQEVGEVKKKKRRWSCIDNCCWFVGCICTVWWFLLFLYKMMPASFPQYVTEAITGPMPDPPGLKLKKEGLTVKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWAEHMSLDNETGMDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMFMAAYDWRISFQNTEVRDQTLSRLKSNIELMVATNGGNKAVIIPHSMGALYFLHFMKWVEAPAPMGGGGGPHWCSKYIKAVVNIGGPFLGVPKAISGLFSAEARDIAVARAIAPGFLDNDVFRLQTLQHVMKMTRTWDSTMSMIPKGGHTIWGGLDWSPEEGYLPNKNKQSTDNTQPTGQDRNKTKVPNYGRMISFGRDVAEAHSSEIEMTDFRGAIKGLNVANSSCRDAWTEYHDMGVEGVRAVADHKVFTADAIIDLLDFVAPKMMARGSAHFSYGVADNLDDPKYEHYKYWSNPLESKLPNAPDMEIFSLYGVGLQTERAYIYKLSPYADCYIPFEIDTTADGDDEDSCLKDGVYTVDGDETVPVLSSGFMCAKGWRGKTRFNPSGIHTYVREYDHSPPANFLEGRGTQSGAHVDIMGNFALIEDVIRIAAGAKGEDLGGDRVYSDIFKWSEKIKLPL* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1559 678 Pfam Lecithin:cholesterol acyltransferase 467 638 IPR003386 GO:0006629|GO:0008374
Lja3g1559 678 Pfam Lecithin:cholesterol acyltransferase 143 390 IPR003386 GO:0006629|GO:0008374
Lja3g1559 678 MobiDBLite consensus disorder prediction 1 47 - -
Lja3g1559 678 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 25 678 - -
Lja3g1559 678 SUPERFAMILY alpha/beta-Hydrolases 116 621 IPR029058 -
Lja3g1559 678 Gene3D alpha/beta hydrolase 150 350 IPR029058 -
Lja3g1559 678 MobiDBLite consensus disorder prediction 379 405 - -
Lja3g1559 678 MobiDBLite consensus disorder prediction 381 402 - -
Lja3g1559 678 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 25 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1559 Lja-Chr3 17108618 17114019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1559 159 678 Acyl Lipid Metabolism Gene Families AT5G13640 75.479 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1559 K00679 - gmx:100800857 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1559 3 17108618 17114019 Lja3g1559 3 17108618 17114019 ECH