Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1506 ATGGTGGTTACCTCCAACCCCATTCGTCTTCTTCCTTCTTCCCTCGCCTCTTTGGCTCACCATCACTCCCCATTTTCACGGCGGTGGCGGCGTCCCTCTTCCATCTCACTCCCCGCAGTTTCTCCCATCCACTCCATTTCTGCCAATGGAGGAGGAGGAGGTGCTGAGATTGATCAAACAGAAATTGTATTCATGGGGACTGGAACTAGTGAAGGGGTTCCGCGAGTTAGCTGCTTGACTAATCCTTTAAGCAAATGTTCGGTCTGTTCGAAAGCGGCGAGACCGGGTGATAAGAATAGGAGACTTAACACCAGCATCCTTATTCGTCACCCTAACCCCTCTGGAACACACAATATTCTTATAGATGCTGGAAAATTTTTCTATCACAGTGCTCTCCAGTGGTTTCCTGCACTTGGGATAAGAACACTTGATGCTGTTATTATTACTCATTCACATGCTGATGCAATTGGAGGTCTTGATGATCTTAGAGATTGGACGAACAATGTTCAGCCATCTATTCCAATATATGTTGCCAAGCGTGACTTTGAGGTGATGAAGAAGACCCATTATTATTTAGTAGATACAAGTGTTGTCTTACCTGGTGCTGCGGTCTCAGACTTGCAATTCAAAATCATATCCGAAGAACCATTTGTAGTACATGGATTAAAATTTACCCCATTACCAGTTTGGCATGGCAAGGGTTATCGCTCCCTTGGTTTTCGTTTTGGCAATATATGCTACATAAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTAAAGGACTGTGAAATTCTAATCATGGATGCACTGAGACCCGATCGCTCTACAGCCACACATTTTGGACTTCCAAGGGCCTTAGAGGAAGTGCGAAAAATTCAACCCAAAAGGACACTTTTCACTGGTATGATGCATCTGATGGATCATGAAGAAGTAAATAGCTATCTTACAAAACTATTGGAGTCTGAGGGTCTTGATGCACAACTGAGCTATGATGGGCTTCGTATACCAGTTAAACTCTAA 1029 0.4363 MVVTSNPIRLLPSSLASLAHHHSPFSRRWRRPSSISLPAVSPIHSISANGGGGGAEIDQTEIVFMGTGTSEGVPRVSCLTNPLSKCSVCSKAARPGDKNRRLNTSILIRHPNPSGTHNILIDAGKFFYHSALQWFPALGIRTLDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAKRDFEVMKKTHYYLVDTSVVLPGAAVSDLQFKIISEEPFVVHGLKFTPLPVWHGKGYRSLGFRFGNICYISDVSEIPEETYPLLKDCEILIMDALRPDRSTATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEEVNSYLTKLLESEGLDAQLSYDGLRIPVKL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1506 342 Pfam Beta-lactamase superfamily domain 117 303 IPR001279 -
Lja3g1506 342 PANTHER HYDROLASE C777.06C-RELATED-RELATED 43 342 - -
Lja3g1506 342 SUPERFAMILY Metallo-hydrolase/oxidoreductase 61 340 IPR036866 -
Lja3g1506 342 PANTHER OS09G0363800 PROTEIN 43 342 - -
Lja3g1506 342 CDD metallo-hydrolase-like_MBL-fold 61 272 - -
Lja3g1506 342 Gene3D - 56 341 IPR036866 -
Lja3g1506 342 SMART Lactamase_B_5a 102 305 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1506 Lja-Chr3 16160938 16166422 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1506 - - mtr:MTR_8g017270 568.54