Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1503 ATGGATCATTACACTTCTCCTGGAGGAAGCTGGACCATGATCCCAACCCACAATTCCAATACCCAATCCCAATCTCAACCCAATCAGGACCCAAATCTCTATCTCCATCAACAGCAACAACAGTTTCTCCATCAACAACAACAACAAACTTTTCAGCAACCACAAACACCTCAATCTCAATCCCAATTTCAACAACAACAGCAACAGCAGCAGCAGCAGCTTTATCAGCAACAGCAGCGCCTTCTCCAACAGCAACAACAGCAGCAGCAGCAGAGCATTCATCAATCGCTTGCCTCTCACTACCAACTCTTACATTTGGTGGAGAATTTGGCTGAGGTTGTCGATCATGGAACCCCAGATCAGCAATCAGAAGCATTGATCACTGAATTGACCAACCGCTTTGAGAAGTGCCAGCAGCTGTTGAACTCAATCTCTGGCTCCATTAGCACCAAGGCCATGACGGTTGAGGGACAGAAGAAGAAGCTAGAGGAAAGCGAGCAATTGCTAAATCAGCGCAGAGACTTGATTGCCGATTACAAGAAATCTGTGGAGGAGCTTGTTAGGTCTGAGCCATAA 576 0.4653 MDHYTSPGGSWTMIPTHNSNTQSQSQPNQDPNLYLHQQQQQFLHQQQQQTFQQPQTPQSQSQFQQQQQQQQQQLYQQQQRLLQQQQQQQQQSIHQSLASHYQLLHLVENLAEVVDHGTPDQQSEALITELTNRFEKCQQLLNSISGSISTKAMTVEGQKKKLEESEQLLNQRRDLIADYKKSVEELVRSEP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1503 191 MobiDBLite consensus disorder prediction 1 40 - -
Lja3g1503 191 Pfam RNA polymerase II transcription mediator complex subunit 9 120 183 IPR011425 GO:0003712|GO:0006357|GO:0016592
Lja3g1503 191 MobiDBLite consensus disorder prediction 45 64 - -
Lja3g1503 191 Coils Coil 68 88 - -
Lja3g1503 191 MobiDBLite consensus disorder prediction 9 40 - -
Lja3g1503 191 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-RELATED 1 191 - -
Lja3g1503 191 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-RELATED 1 191 IPR038790 GO:0016592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1503 - - gmx:100803884 177.948