Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1495 ATGGCTACAACATTTGGTGCAGTCAAGTTCTGCTTAGTTGTTCTGTGCCTCTGGAACTTTCTACCTCCTTGTCAAGGTAAGCTGAACTGGCATGAATATGGGTACCCTTTTATTAAAAAGGCAAGCTCATTTTCATCACCATCAATTTCAACTACCTCCCTCAATAATGCTTATGACTACATAATACTGGGGGGTGGCACAGCAGGGTGTCCCTTGGCTGCAACACTCTCTCAAAACTTCAGTGTCCTGTTGCTTGAGAGAGGGGGGGTCCCTTTCAGCAACCCCAATGTTACATTTCTATCAAATTTCCACATTACCTTGGCAGACACTTCACCAAGTTCAGCTTCCCAATACTTCATCTCAACAGATGGAGTTTTAAATGCAAGGGCAAGGGTTCTGGGTGGTGGCAGTTCTATCAATGCTGGCTTCTATACCAGAGCAAGCACAAGGTTTATAGAGAAGGTGGGGTGGGATGCAAAGCTAGTAAATGAGTCATATCCATGGGTTGAGAAGCAAATTGTACACCGTCCAAAATTCTCAGGTTATCAGAGAGCAGTGAGGGAGAGTCTTCTAGACTCTGGTGTGTCTCCTTTTAATGGCTTCACCTATGATCATATCTATGGAACCAAGGTTGGTGGAACCATTTTCGACAGATTCGGCCGCCGCCACACTGCTGCTGAACTTCTTGCTACTGCCAACCCTGACAAACTCACTGTTCTAATCTATGCCACTGTCCAAAAGATTGTTTTTGACACAAAAGGAGAAAAACCAAGAGCTGTGGGGGTGATTTTCCAGGATGAAAATGGGAAGCAGCATGAGGCAGTTCTGGGGAATGATAAGCATAGTGAGGTGATAGTGTCTACTGGGGCACTTGGGACTCCTCAAATGCTGATGCTTAGTGGAATTGGGCCAAAAGCTGAACTCCAGAAGTTGAACATCTCAGTGGTTCTTGACAATCCATTTGTTGGGAAGGGAATGGTGGATAATCCCATGAATACAATTTATGTTCCTTCTAATAGGCCTGTTAAGCAGTCACTCATACAAACTGTGGGTATCACCAAAAAGGGTGTGTTCATAGAGGCTAGCAGTGGGTTTAGTCAGTCCAACAGTAGCATTCACTGCCACCATGGTATCTTGTCAGCTGAGATTGGACAACTCTCCACAATTCCTCCCAAGCAAAGATCAATAGAAGCTGTTAAAGCTTTTATCAAGAACAAGCGAGACGTACCAATTGAAGCATTCAGGGGTGGTTTCATCTTGTCAAAAGTTGCCAATGCTTGGTCAGTAGGAGATCTCAAGTTGGTCAACACCAATGTGGAAGACAACCCTGCAGTCACCTTCAACTACTTCAGCCACCCCTATGATCTTCAGCGATGCGTGGAGGGGATCCGCTTGGTGATTAAGGTAGTCCAGTCAGAACACTTCACTAACTACACTAAGTGTAAGAGAAAAACCACAGAGGATCTTCTTGACCTTTCTTTGAAGGCTAATGTCAACCTCATCCCCAAGCATGCCAATGACACAAAGTCACTAGAGCAGTTCTGCAAAGACACTGTGATCACCATTTGGCACTACCATGGTGGGTGCCATGTGGGCAAGGTGGTTAGCCCTGAACATATGGTTCTTGGTGTTGAAAGACTCCGCGTTGTAGATGGATCGACATTTTCTGAATCGCCAGGAACAAATCCTCAAGCCACTGTGATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGACACAGGTTGGGGAAATTGGCTGGTATATAA 1770 0.452 MATTFGAVKFCLVVLCLWNFLPPCQGKLNWHEYGYPFIKKASSFSSPSISTTSLNNAYDYIILGGGTAGCPLAATLSQNFSVLLLERGGVPFSNPNVTFLSNFHITLADTSPSSASQYFISTDGVLNARARVLGGGSSINAGFYTRASTRFIEKVGWDAKLVNESYPWVEKQIVHRPKFSGYQRAVRESLLDSGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLATANPDKLTVLIYATVQKIVFDTKGEKPRAVGVIFQDENGKQHEAVLGNDKHSEVIVSTGALGTPQMLMLSGIGPKAELQKLNISVVLDNPFVGKGMVDNPMNTIYVPSNRPVKQSLIQTVGITKKGVFIEASSGFSQSNSSIHCHHGILSAEIGQLSTIPPKQRSIEAVKAFIKNKRDVPIEAFRGGFILSKVANAWSVGDLKLVNTNVEDNPAVTFNYFSHPYDLQRCVEGIRLVIKVVQSEHFTNYTKCKRKTTEDLLDLSLKANVNLIPKHANDTKSLEQFCKDTVITIWHYHGGCHVGKVVSPEHMVLGVERLRVVDGSTFSESPGTNPQATVMMMGRYMGVKILRHRLGKLAGI* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1495 589 Pfam GMC oxidoreductase 428 572 IPR007867 GO:0016614
Lja3g1495 589 PIRSF Alcohol_oxidase 38 587 IPR012132 GO:0050660
Lja3g1495 589 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 528 - -
Lja3g1495 589 ProSitePatterns GMC oxidoreductases signature 2. 289 303 IPR000172 GO:0016614|GO:0050660
Lja3g1495 589 Gene3D - 175 521 - -
Lja3g1495 589 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 4 589 - -
Lja3g1495 589 Gene3D - 58 571 IPR036188 -
Lja3g1495 589 Pfam GMC oxidoreductase 58 330 IPR000172 GO:0016614|GO:0050660
Lja3g1495 589 PANTHER OSJNBA0019K04.7 PROTEIN 4 589 - -
Lja3g1495 589 SUPERFAMILY FAD/NAD(P)-binding domain 53 581 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1495 Lja-Chr3 16036249 16043411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1495 58 582 Miscellaneous Gene Families AT5G51950 53.774 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1495 K15403 - gmx:100779461 997.653