Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1493 ATGATGGGTGGCACCGCCGTCTCCGCCCGTTCAACCGCCGCCATCTCCGTCGCTATCCTCCTTCTCATCTCCTCCGCCCACTCCTTCTACCTCCCCGGCGTTGCTCCTCGCGATTTCCAAACCGGTGATGCCCTTTATGTCAAAGTGAACAAATTATCATCTACCAAGACTCAACTTCCGTATGACTACTACTACTTGAAGTATTGCAAACCCTCCAAGATTCTGAACAGCGCAGAAAATTTGGGAGAGGTTCTTCGAGGCGATCGTATTGAAAATTCTATATATACGTTTCACATGAGGAAAGAACAGTCTTGTACTGTTTCTTGTCATCAAATTTTGGATGCTGAAGCTGCGAAGAATTTTAAAGAAAAAATTGATGATGAATATCGAGTGAACATGATTTTGGATAACCTTCCAGTTGCTGTTCTTAGACAAAGGAGGGATGGAAGTCAATCAACAACATATGAGCATGGTTTTCGTGTTGGGTTCAAGGGAAACTATCAAGGGAGCAAGGAAGAGAAATATTTTATCAATAACCACTTGAGTTTTAGAGTCATGTATCACAAGGATCCTGAAACTGGTTCTGCTCGCATTGTTGGATTTGAGGTCACACCAAACAGTATTAATCATGAATACAAGGAGTGGAATGACAAAAATCCGCAAGTAACAACATGTAATAAAGATACCAAGAATTTGATGCAAGGTAGTACTGTCCCACAAGAAGTTGATACAGGCAAGGACATCGTATTCACATATGATGTTTCCTTTAAGGAAAGTGATATCAAATGGGCATCACGATGGGACACATATCTTCTAATGAATGATGATCAGATCCACTGGTTTTCTATCATAAACTCTCTGATGATTGTGCTTTTCCTTTCTGGAATGGTGGCAATGATCATGATGAGGACTCTTTACAGAGACATTGCCAATTATAACCAGCTAGAAACCCAAGATGAGGCCCAAGAAGAAACAGGGTGGAAACTTGTTCATGGAGATGTTTTCAGGGCACCAGTCAATTCAAATTTGCTTTGTGTTTATGTTGGTACTGGTGTTCAGATCTTTGCAATGACACTTGTGACAATGATATTTGCTTTGCTAGGGTTCCTATCTCCGTCCAATCGGGGTGGTCTCATGACTGCAATGGTTCTATTGTGGGTTTTTATGGGTTTATTTGCTGGCTACTCCTCAGCACGTTTGTACAAGATGTTCAAGGGCACAGAGTGGAAGAGGAATACCTTAAAAACTGCATTTATGTTTCCAGGCATACTTTTCGCTATCTTCTTTGTGCTGAATGCTTTAATCTGGGGGGAAAAGTCCTCTGGAGCAGTCCCTTTTGGAACAATGTTCGCTCTAGTCTGCCTATGGTTTGGTATTTCAGTGCCCTTGGTCTTTGTGGGCAGTTACTTGGGTTTTAAAAAACCAGCAATTGAAGACCCTGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAGCAGGCATGGTACATGACACCCGTCTTCTCTATTCTTATTGGTGGCATTCTTCCATTTGGTGCAGTGTTCATCGAGCTCTTCTTTATCCTGACATCAATATGGCTAAACCAGTTCTACTACATCTTTGGCTTCCTTTTCATAGTGTTTGTTATCCTATTGATCACCTGTGCAGAGATTACGGTTGTGCTTTGCTACTTCCAATTGTGCAGTGAAGACTACAACTGGTGGTGGAGAGCTTACCTTACTGCTGGATCCTCAGCTCTGTACCTCTTCCTTTACTCAATTTTCTATTTCTTCACTAAGTTGGAGATTACAAAGCTGGTCTCGGGCATCCTTTACTTTGGATATATGGTAATTGGTTCATATGCCTTCTTTGTGTTGACTGGAACTATTGGCTTCTATGCTTGCTTCTGGTTTGTCCGCAAGATCTACTCTTCTGTGAAGATTGACTGA 1929 0.4189 MMGGTAVSARSTAAISVAILLLISSAHSFYLPGVAPRDFQTGDALYVKVNKLSSTKTQLPYDYYYLKYCKPSKILNSAENLGEVLRGDRIENSIYTFHMRKEQSCTVSCHQILDAEAAKNFKEKIDDEYRVNMILDNLPVAVLRQRRDGSQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKNPQVTTCNKDTKNLMQGSTVPQEVDTGKDIVFTYDVSFKESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDEAQEETGWKLVHGDVFRAPVNSNLLCVYVGTGVQIFAMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFAIFFVLNALIWGEKSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKPAIEDPVKTNKIPRQVPEQAWYMTPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITVVLCYFQLCSEDYNWWWRAYLTAGSSALYLFLYSIFYFFTKLEITKLVSGILYFGYMVIGSYAFFVLTGTIGFYACFWFVRKIYSSVKID* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1493 642 Pfam Endomembrane protein 70 60 598 IPR004240 GO:0016021
Lja3g1493 642 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 6 642 - -
Lja3g1493 642 SUPERFAMILY MFS general substrate transporter 283 464 IPR036259 -
Lja3g1493 642 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 6 642 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1493 Lja-Chr3 15992619 15996830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1493 27 642 Miscellaneous Gene Families AT3G13772 89.286 0.0 1163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1493 K17086 - gmx:100781403 1210.28