Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1480 ATGTCTGGAATTGTGGTTGTTTTCGACTTTGATAAGACCATCATTGATATCGACAGTGATAACTGGGTTGTTGACGAGTTGGGTTTCACCGATTTGTTTAATCAGCTTCTTCCCACCATGCCTTGGAACTCCCTCATGGATAAGATGATGATGGAGCTTCATTCAAAAGGTGTAACTATTGAAGAGATTGAAGAGGTTCTCCATAGGATTCCTATTCACCCCAGAGTGATACCTGCTATTAAAGCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACATGTTTTTCATTGAGACAATTTTGGAGCACTTAAAAATAAAGGAATACTTCTCAGAGATTAACACTAACCCTGGTTATGTTGAAGAAGGAAGGTTAAGAATTTTGCCTTATCATGATTTCAATAAGGCTCCCCATGGCTGCTGCGGTTTGTGTCCTCCAAACATGTGCAAGGGTTTAATCATAGACAGAATCCAAGATTCATTTTCTCAAGATGATGACAAGAAAATCATATACCTTGGCGATGGGGCTGGGGACTATTGCCCAAGCTTAAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCTGTGTGGGACTTAATATGCAAAGACCCTTCACTTCTTAAAGCTGAAATCCATGGTTGGACTGATGGAGAAGAATTGGAGCAAGTTCTGTTGCAGTTGATCAGCCAAATTTCTATGGAGAAAGATGCTCTGTTTATGTCATCTGACTGCAAAACACAGACTCTTTTGATCTCTGCTCATGAGCCTTTGCCTAAAGTTCTTCATGTTCGACCATAA 819 0.4029 MSGIVVVFDFDKTIIDIDSDNWVVDELGFTDLFNQLLPTMPWNSLMDKMMMELHSKGVTIEEIEEVLHRIPIHPRVIPAIKAAHALGCDLRIVSDANMFFIETILEHLKIKEYFSEINTNPGYVEEGRLRILPYHDFNKAPHGCCGLCPPNMCKGLIIDRIQDSFSQDDDKKIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAEIHGWTDGEELEQVLLQLISQISMEKDALFMSSDCKTQTLLISAHEPLPKVLHVRP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1480 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Lja3g1480 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Lja3g1480 272 Gene3D - 2 188 IPR023214 -
Lja3g1480 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
Lja3g1480 272 SUPERFAMILY HAD-like 4 190 IPR036412 -
Lja3g1480 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Lja3g1480 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lja3g1480 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1480 Lja-Chr3 15804044 15806227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1480 K13248 - gmx:100782134 479.559