Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1472 ATGTACGGCGGAGCCTCCAAACTTGGCCGTGGCGCCCACAAGCGCTCTTCCTTCCCCCCACCTCATCGCCCCTCCGCCCCCTCATCCGCCGCCAACCGCCTCTCCGTTGGCGGCTCCAACCGCAAAACACCGCCGGCTGTGGAGGAGAGTTTCAACCTAGTCTCCGGCACTGTCCCTCCCGCCTTCTCCATGATCATAAAGCTGGCGCCGGACCTCGTCGACGAGATCAAGCGCGTGGAGGCACAGGGTGGCACCGCTCGTATGAAATTCGATCCCAACCCCAACAATTGTAACGGAAACATTATTGATGTTGGTGGGAAGGAATTCAGATTTACGTGGTCGAAGGATGGTGACCTCTGTGATATCTATGAAGAGAAGCGAAGTGGTGAAGAGGGGAATGGTTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAGCTCAATGTACAGCGTATCTTGGACGAGTCAACTAAGAAGCAAGTCAAGATGCGGTCAAAGGAAGCTGAACTTAAGCTCAAGTCACGCAAAGCCATTGTCTTAGAGCCGGGGAACCCACCTCTGAAGAGCCAGATAAAGGCATTAGCTGCTGTGGAGGCTACAACCTGGAAAAATTACACTAAAAAGAAAGAGGCGGTACTTAAGAAACGGAAAGCGGAGACTCTTCCAGTTCGAGGCCCCCAAAAATCTTCACATAAACCTGGATTGACGTCAACAAGTACTACTACCAAGGGTAGACATTCTTCTCCTCTTCCATCTCCACCGGATCATATTGCTGCTTCACCCTCTCCACTGGGAGCTGTAAATATCTCTAAGAACCTTGATGATGCTGTGCCATCACAAATGATTCGCAAACAAGATACTAATGCTGTTGCTGAGAAAGAAATCCCTGCCAAAACAAGCAATTCTATGAGGAAGACACCAGGAGGCAAAGGAAATATTGGATTGAAGCCAATAGATTTGCAGGGCATGTTAATATCTCTTCTAAAGGATAAGCCATCTGGAATGACTTTTAAGTCCATGGAGAAAGCTGTTGCAGATACATTTCCAAATTCTGTGAAGCAAATTGAGGTCATTATAAAAAAAATTGCAAAATTCCAAGCCCCGGGAAGGTATATCTTAAGACCAGAAGTGGATTCAGAAAACTTCAGGAAACCTCAGACTGAAACTGGAAGTTCTCTTGAAGACAATCGTAACCACATACCTGCTAATGAAGAGTTACATGATCAGAGATCAGTTCCACTGGGAGGCTTTGAGGAGAGAGTCCCCAGCGACAATTTGGAGGAAATGGTGCAAGTAGAATCCAAAGGAGAAGAAGAATTAAACCCATTGGAAAAAATTGATGCCCAACATACTTCACCTGATATTGTTGGTGACAAAAAAGGTTCTGTTCATGGTGAAGGGAAAGCAGGAAGCTCTAGTGACAGTGGAAGTGACAGTGATAGTGAAAGTGACAGCAGTGATAGTGCAAGTGACAGTGGAAGCCATAGTAGGAGCAGAAGCAGAAGTCCCGCTGGATCAGGGAGTGGGAGTAGTAGTGACAGTGAAAGTGATGCATCTTCCAGTAGCAAGGAGGGACTGGAGGGTTCTGATGAGGATGTAGATATTCTGACTAGTGATGATGAAAAAGAGTCAAAGCACAAAACAGAAGCCTCTGATCAAAGGATGTCTTTTCCTGTGCCAGTAAAATCTCCTGACAGGAGATCTATGCTGATCGAGGTTGATGAGAAGCGGGATGCTAATGAATCTGATGCTGTTGAGATTGAAAAAGACTCACCTGAGGAACGGGAACCTGAAATGGCTCCAACTACAGCTACCATTTCCGGAAAAGGTGGAAAATATGCAGAAGAGGGAAAACACTTTTCACCCGATCCTCAACAGCTCTGGGAGCGCCAAAATTATATAGAGTGTTTGTTTGATGAAAGGGAAAATGAGGTTAAAGATAGCTCAAGGCATGAACAGTCTGACAACTCTGATAAGTCATCTAAAGGTAAACATAAGAGGGGTTCTGATGTGAGGAACATTGATGGGAAATACGAACATACAAAGAGGTTGAAAGCAGGTAACTTGACTCATGAACCATTTTCTCGTGGTACAGATGCGCAGTTGTTTGAGAATTCACGGAAAATTTCTCCTGTCGAATTTACTGAAGACACTTCGAAGGGTCCCACTACTCAAGTGATGAATAGAGCTGATAGGCAAGGAAACTCCAATGTTGGTTTACAGAAAGTATCCAATCAAGCATTTCCTGGAAAATCTAGTTCAGATTTACCACAAACCGTTCAAAGGTCCTTTGACCAAACCCCTCTTGGAAACCCAAACCCATTGGAAAAATCAGATAAACATGGTGAAAGCATGGGGCACAGGAAAAAACACTCAAGAAAGGACTTTCATGCGCGTGAAGTTTCTTCTATGCAGAAAGATAAATCTCATAGAAATGCCCAAAATGAAGATATCAGTGCAGCTGGGAAAAAAATCCCCAAGAACTCCAGGGACGGTAGTAATGGAAGCAAACAGTCACTTTCCATGGATTCTAATTACCCAAAACAAGGGGAAATGGGTAGTAAGTCAAAGGAAGGCCGACAAAGTACCCAGTCGCTATTGGGAACATTCCCTACGGACAACAGGTTCAGTCTTGATAAGTCCCCTGTAGTTGATGGCCTTGGTGTCTCTCTTCAAAGAGAACCATCAGACTTGGAGTTAGGTGAATTTCGTGAGTCCACACCTGACGAAACCCATGTCACAAAGCAATTTGAGCGAAAAGGTCCATTTAAACATCTTGAAAACAAAAAAACTTCAGAGGACAGGAATTCAGATATTACTAAAGGAAAACCTTTTGTAAGTTCTAGTTTTCCCAGCAATTTGCAAAGCACAGATAAAAAGAACACAGAAAATCATTTTGATGATTCAACAAAGTCTCGTTCTAGAGTGATGCCGGCAGAATTTAATAAATTTAGAAATAATGAATCCGGGGTGAGCCAGGATATTGATTTGGATGGTCATACTGAAAGCAATAGAAGAGCACCTGCAAATGGATCTAAACAAGACACTAACCTTGGAATCAATTCCTATCCCGTGAAAGAAAGTAAAAGACAAACACCTAATTCATTGGAAGCGGTGGCTGATGGAGGAAAGGATTCTGTGTTTGCAGCAAGAAATAATATCGAACAAAGGAAGAGAGAATCTTCTTCAGATGAAAATAGCTGCTCTTATTCAAAGTACGAAAAAGATGAACCTGAATTGAAGGGGCCTATAATGACTTTTTCACAATATAAAGAATATGTGCAGGAGTATGGTGATAAATATGATAGTTACTGCTCCCTGTACAAGATTTTGGAGAGTTACAGGAATGAGTTTCAACAACTAGGAGATGATTTAGTATATGCTAAAGGCAGGGATATGGATAGATATTATGACATCTTAGAACAGCTGAAGGAATCCTATCGTCGTTGTGGACCAGTATGTTTTCTTCAGCTTCACCCATTTATGCAGTATTTGCATAATAGTAATAAACTAATAATGCAACTGTATAGAGCCCAAATGTTCTCAGATCTTGTTTTCATATATTCTTGTTCTACAGTCAACAGTTCCACAAAATTTTATGCCCTTCCTATTATATCTCGTCCACTTACGTTTCTGTTTTGA 3639 0.4295 MYGGASKLGRGAHKRSSFPPPHRPSAPSSAANRLSVGGSNRKTPPAVEESFNLVSGTVPPAFSMIIKLAPDLVDEIKRVEAQGGTARMKFDPNPNNCNGNIIDVGGKEFRFTWSKDGDLCDIYEEKRSGEEGNGLLVESGCAWRKLNVQRILDESTKKQVKMRSKEAELKLKSRKAIVLEPGNPPLKSQIKALAAVEATTWKNYTKKKEAVLKKRKAETLPVRGPQKSSHKPGLTSTSTTTKGRHSSPLPSPPDHIAASPSPLGAVNISKNLDDAVPSQMIRKQDTNAVAEKEIPAKTSNSMRKTPGGKGNIGLKPIDLQGMLISLLKDKPSGMTFKSMEKAVADTFPNSVKQIEVIIKKIAKFQAPGRYILRPEVDSENFRKPQTETGSSLEDNRNHIPANEELHDQRSVPLGGFEERVPSDNLEEMVQVESKGEEELNPLEKIDAQHTSPDIVGDKKGSVHGEGKAGSSSDSGSDSDSESDSSDSASDSGSHSRSRSRSPAGSGSGSSSDSESDASSSSKEGLEGSDEDVDILTSDDEKESKHKTEASDQRMSFPVPVKSPDRRSMLIEVDEKRDANESDAVEIEKDSPEEREPEMAPTTATISGKGGKYAEEGKHFSPDPQQLWERQNYIECLFDERENEVKDSSRHEQSDNSDKSSKGKHKRGSDVRNIDGKYEHTKRLKAGNLTHEPFSRGTDAQLFENSRKISPVEFTEDTSKGPTTQVMNRADRQGNSNVGLQKVSNQAFPGKSSSDLPQTVQRSFDQTPLGNPNPLEKSDKHGESMGHRKKHSRKDFHAREVSSMQKDKSHRNAQNEDISAAGKKIPKNSRDGSNGSKQSLSMDSNYPKQGEMGSKSKEGRQSTQSLLGTFPTDNRFSLDKSPVVDGLGVSLQREPSDLELGEFRESTPDETHVTKQFERKGPFKHLENKKTSEDRNSDITKGKPFVSSSFPSNLQSTDKKNTENHFDDSTKSRSRVMPAEFNKFRNNESGVSQDIDLDGHTESNRRAPANGSKQDTNLGINSYPVKESKRQTPNSLEAVADGGKDSVFAARNNIEQRKRESSSDENSCSYSKYEKDEPELKGPIMTFSQYKEYVQEYGDKYDSYCSLYKILESYRNEFQQLGDDLVYAKGRDMDRYYDILEQLKESYRRCGPVCFLQLHPFMQYLHNSNKLIMQLYRAQMFSDLVFIYSCSTVNSSTKFYALPIISRPLTFLF* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1472 1212 MobiDBLite consensus disorder prediction 940 958 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 795 813 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 896 939 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 420 464 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 566 596 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 1004 1034 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 1050 1074 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 715 772 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 397 413 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 229 247 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 959 973 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 376 1074 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 537 551 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 1 46 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 828 875 - -
Lja3g1472 1212 Pfam Occludin homology domain 1081 1167 IPR010844 -
Lja3g1472 1212 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1074 1183 IPR010844 -
Lja3g1472 1212 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 9 1151 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 633 688 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 210 264 - -
Lja3g1472 1212 MobiDBLite consensus disorder prediction 485 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1472 Lja-Chr3 15602958 15609797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1472 - - gmx:102660010 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1472 3 15602958 15609797 Lja3g1472 3 15602958 15609797 ECH