Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1471 ATGAATTCTGCGATGAATGATATGAATTTGATTCAGCAATCCCAGAGGCATCACTTGGTTATGAAGGAGATTGGTGACGAGATTGATTTAGAAATTGGACCTGGGGAAGAAGATCCTTCATTTGGTAATGCTACTCTAATCAGTGTGCCGATGCAAGAATCTTCCACAGAAGATCATGGGGAAAACAAGCAGATGGTAGTGGCTCCTCATCTTCTTAATGATACTCAAGATATGTCTGCAACCCAGCCAGGGAAAAGAAAGAAAAAGGTTGTTAAAAGATGGAGAGAGGAATGGGCAGACACCTATAAATGGGCTTTCTTGGATGTGAGAGATGGGACACCAAGGATTTTCTGCTCTGTCTGCAAAGAGTATGGCCGGAGGCATAGAAGAAACCCTTATGGGAATGAGGGGAGTCGTAACATGCAGATGAGTGCCTTGGAAGAGCACAATAATAGTCTGCTTCACAAAGAGGCCGTCCGTCTTCAAACGGCCTCTAAAGATAAAATTATGGTCGAGAAGCCCATCTATGTAAAAGATGTTATGTCAAAAACAGCGGGATCAATTCTTGAAGCTACACTAAAAAGGGATCCTCATGAGGTTGAGTTCATTCAGGCAATCCAGCAGGCAGTTCAATCTCTTGAAAGAGTCATAGCGAAAAATTCTCATTATATTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTCCATGGGTGGATGATAGGGGTGAGACACATGTTAATCGGGGGTTTCGGGTACAATTTAACCAGTCAACGGGTCCATGTAGAGGTGGCATTCGTTTTCATCCGTCAATGAATTTAAGTATTGCCAAATTTCTTGGTTTTGAGCAGACTTTAAAGAATGCCCTATCACCTTACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAGAGTTTCATGAGTGAAATATATAGATACCTGGGTCCTGACAAGGACCTTCTATCAGAGGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTGGGACAATATAGACGTGTAGCTGGTCTTGTTCAGGGAGGTTTTACAGGGCAAAGAACATTGTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAACTCATGCTTGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTAGTGAGTGGTTCTGGAAAGATCGCAATATATGTTCTAGAGAAGCTGATTGCCTATGGTGCTGTTCCCATTTCAGTATCAGATTCTAGGGGATATTTGGTTGATGAGGATGGATTTGATTACTTGAAAGTATCATTGTTGAGAGACATCAAAGCTCAACAGAGAAGTCTGCGAGACTATTCAAAGACCTATGCTCGGTCCAAGTATTATGATGAAGCAAAACCCTGGAGTGAAAGGTGTGATCTTGCATTTGCTTGTGCTTCACAGAATGAAATCGATCAATCTGATGCCATTAATTTGGTTAATTCAGGTTGTTGTATACTAGTAGAAGGTTCAAACATGCCTTGTACCCCTGATGCAGTTCAAGTTCTGCGGAAGGCTAATGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAGCTTGAATTGAACCATGACTGCAGTTTGATGCACTGGTCACCAGAGGACTTTGAATCTAAATTGCAGGTAGCAATGAAACAGACTTATGACAGAGCTATAAAAGCTTCAACCGATTTTGGTTATCCTAAAGAAAGCCCTGAGGCTCTGGCACATGGAGCAGTCATCTCTGCCTTTCTAACTATTGCTCAAGCCATGACTGATCAAGGTTGTGTATAG 1887 0.4255 MNSAMNDMNLIQQSQRHHLVMKEIGDEIDLEIGPGEEDPSFGNATLISVPMQESSTEDHGENKQMVVAPHLLNDTQDMSATQPGKRKKKVVKRWREEWADTYKWAFLDVRDGTPRIFCSVCKEYGRRHRRNPYGNEGSRNMQMSALEEHNNSLLHKEAVRLQTASKDKIMVEKPIYVKDVMSKTAGSILEATLKRDPHEVEFIQAIQQAVQSLERVIAKNSHYINIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFNQSTGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEIYRYLGPDKDLLSEEMGVGTREMGYLLGQYRRVAGLVQGGFTGQRTLWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAIYVLEKLIAYGAVPISVSDSRGYLVDEDGFDYLKVSLLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDLAFACASQNEIDQSDAINLVNSGCCILVEGSNMPCTPDAVQVLRKANVLIAPAMAAGAGGVVAGELELNHDCSLMHWSPEDFESKLQVAMKQTYDRAIKASTDFGYPKESPEALAHGAVISAFLTIAQAMTDQGCV* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1471 628 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 379 626 IPR006096 GO:0006520|GO:0016491
Lja3g1471 628 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 233 360 IPR006097 GO:0006520|GO:0016491
Lja3g1471 628 Gene3D Glutamate Dehydrogenase, chain A, domain 3 187 230 - -
Lja3g1471 628 Gene3D - 385 550 - -
Lja3g1471 628 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 187 372 IPR046346 -
Lja3g1471 628 PANTHER BNAA06G02140D PROTEIN 1 628 - -
Lja3g1471 628 Gene3D Leucine Dehydrogenase, chain A, domain 1 231 366 - -
Lja3g1471 628 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 1 628 - -
Lja3g1471 628 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 548 559 IPR006095 GO:0006520|GO:0016491
Lja3g1471 628 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 290 304 IPR006095 GO:0006520|GO:0016491
Lja3g1471 628 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 369 391 IPR006095 GO:0006520|GO:0016491
Lja3g1471 628 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 411 431 IPR006095 GO:0006520|GO:0016491
Lja3g1471 628 SMART ELFV_dehydrog_3 380 626 IPR006096 GO:0006520|GO:0016491
Lja3g1471 628 Gene3D Glutamate Dehydrogenase, chain A, domain 3 557 628 - -
Lja3g1471 628 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 379 626 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1471 Lja-Chr3 15589827 15600735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1471 203 506 EF-hand Containing Proteins AT5G07440 27.961 1.11e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1471 K00262 - gmx:100788009 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1471 3 15589827 15600735 Lja3g1471 3 15589827 15600735 ECH