Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1470 ATGACGGACTACGCGCAAGAACAAGAAATGGAGATTGAAGCATTAGAAGCTATACTTATGGATGAGTTCAAAGAAATACACTCTGGTGAAAGTGGTCTAAGTACTTCCAATCGGTGCTTTCAAATAAAGATAGCACAGGATGAGGATGGAGATATGCCAATCAGCTATCCAGCTCAACTGGGTTTGATCTTCGCACACACAGAAAGATATCCTGATGAACCTCCACTTTTAAATGTTACGAGTTTACAAGGAATACCTCCTGAAGATTTAAGGGCTGTGAAAGAAAAACTTCAACAAGAGGCATCTGAAAATCTTGGTATGGCTATGATCTACACACTCGTTACCTCAGCTAAAGAGTGGTTGGATGAGCGGTTTTGTCAAGACTCTGGTGATGTGAGTGCTGAAGCAGAAGAGGCAGCCAAAGAGGATATAGTTGTACCCCATGGGGAACCAGTTACTGTTGAAACATTTTTGGCATGGAGGGAGAGGTTTGAAGCTGAGCTAGCACTTGAACGAGCCAAGTTAATGCCAGAGTCCGCGCTTGCAGTTTCCAAGGAAAAGAAACTATCTGGCAGACAGTGGTTTGAAAGTGGAAGAGCGAAAGGAACAGCTCCTCTCGCTGAGGAATCTGCTGAGGAGGATGAGGATGACATTGACATTGACTTCGATGATGAAGATTTTGAAGATGATGAAGATGATATGCTTGAGCATTATCTGGCTGAAAAATCTGATTCATCCACACATTCTTCCAAGAGAGCTAGTTAA 765 0.4288 MTDYAQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQIKIAQDEDGDMPISYPAQLGLIFAHTERYPDEPPLLNVTSLQGIPPEDLRAVKEKLQQEASENLGMAMIYTLVTSAKEWLDERFCQDSGDVSAEAEEAAKEDIVVPHGEPVTVETFLAWRERFEAELALERAKLMPESALAVSKEKKLSGRQWFESGRAKGTAPLAEESAEEDEDDIDIDFDDEDFEDDEDDMLEHYLAEKSDSSTHSSKRAS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1470 254 ProSiteProfiles RWD domain profile. 10 124 IPR006575 GO:0005515
Lja3g1470 254 MobiDBLite consensus disorder prediction 199 226 - -
Lja3g1470 254 SUPERFAMILY UBC-like 1 123 IPR016135 -
Lja3g1470 254 Coils Coil 5 25 - -
Lja3g1470 254 Gene3D Ubiquitin Conjugating Enzyme 1 127 IPR016135 -
Lja3g1470 254 PANTHER RWD DOMAIN-CONTAINING PROTEIN 1-RELATED 2 246 - -
Lja3g1470 254 SMART RWD2001b 10 124 IPR006575 GO:0005515
Lja3g1470 254 MobiDBLite consensus disorder prediction 209 226 - -
Lja3g1470 254 PANTHER RWD DOMAIN-CONTAINING PROTEIN 2 246 IPR040213 -
Lja3g1470 254 Pfam RWD domain 6 121 IPR006575 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1470 - - gmx:100788547 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1470 3 15582395 15588663 Lja3g1470 3 15582395 15588663 ECH