Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1469 ATGGGTAGTTCGGAAGAGTCCAACATCAATGCGTCGGTGGGTGGTTTGGTTTGGGTCCGGCGCCGGAATGGGTCATGGTGGCCGGGTCAGATACTGAGTCTGGATGAAGTGTCGGAGGACTGCTTGGTTTCTCCGAAATCGGGTACTCCTGTCAAGCTGTTAGGTCGAGACGATGTTAGTGTGGATTGGTATAATCTTGAAAAATCAAAGCGGATAAAAGCTTTTCGTTGTGGAGATTATGATAAATGCATTGAGAAGGCAAAAGTATCTGCTGCCAGTTTAAACAAGAAGGCAGTAAAGTATGCTCGAAGGGAATATGCTATTATTCATGCTCTTGAGCTAGAGAGTGCTATCCTGGACAAGGAAAACTCATGCTCCAGATTAGATAGACCTGGTAGTGAACATGGTGGATCAGCTGGAGAATTACCAATCATATCTGACTCTGGTGATGACAATGAGGATGTGACCAATGATCTGACTGACTCTGAAGTCAATTCTAATTCAGCTCTAGAATTATCACAATCTGCTATATCTTTTGAAGAGCCTAATCATAATGGTTCTTTAAAGATGCAATCTACACAGGGAAGGAGGAGAAGAACACCTAATGATTCTGAAGATGATGGTACTGAAGGAGTCAAGCGAATGAGAGGACTTGAGGACCTGGGCATTGGCGTAGTTTCAAAGAGAAAGGTCCAGGGCACTGGTACAACTGAGATAGTTCAGAATGGTGGTGCCTCACTCAACAAAACAACCGCAGGGAACTGCCTGGTGAACGGAACTTCTGTTAATGGTGGTAAGGGTTATTCTTCAACACTGAAAAGGAAGAGATCACAAGTGCCAAATGTTCATGAATTCTTGAAAAGGAAAAACCGACGCCGGCCATTGACAAAGGTTTTAGAGAGTACAGCCATGTTACCAGTTCCTGTCAATTGTGATCAGCTTCCTAGTTCAAGCAGTTCTCCACTAAATGGGATAACTGATGGAAGGATTTCAGGATTAGATTCTAATGATTTAAATAAAGGTTCTCCAACTGCAAATCACAATTCAGATAGCATTGATGCTGCTTGTGAGAATGGGGCTTCATTAATTGTTCATGACCAGTGCAATGGTGCTTCGGCTTTCCATATCGATGACAGGGTTATGGAGAATGAGACTTCTGGTATACCAGGGCTAGTTGGCAATGGTTCTCCAGACAAACTATTTGATGTGCCTTTTGTTGGGGTTCTGGGGGAGGAGAAGAACCCTCCAGGTTCGTCACCCATACTTGTTTCTTGTTCATCTGGCAAGCCTCAAATTTGTGCGTCGGGTCAGCAATCTTGTCATGCTAGTCAATCTGACACTGTGTCATTGAGAAATGAGGGCAAGAATGAATATGGTTGTACCATTTCAGCTGCTGGTGACAGTATAGTTGGCCATAGTGCAGGCAAAGATAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAATTCAAGACATACTAGTAAAAGTAGAAAACAAGTAAGAAAATACATGGACATAAGCCGAGAATCCAGTGCTTATTTACAAGGAATAGGGAACTCAGATGGATTCTGTCTGAATGCTGGTCAGAAAGTTGATTCAAATGGCATGTGTGCACCTAATGCTTCACACAATCGTTCTTCTCAAATTAAGTGCAAACCTGTTTCTGAAGGCCAATCAGAAGGATTTGGGGACATGGCAAAGCATATCAGGGGTACAGTGGCAGAGGCGAAGCTATTACCTGATATGCCTCTCACCCCTCAGAGATCGCTTCCTTATCGCCATTCACGCTTCACTGTTAACTCCAGATATCAAATGGCAGATTTTCCTGGAAGAAATCATTGTTCCGATGGTTCGCTATATGATGTTAAGGTAGAAGTTAAATCCAGCTACAGGCCACAACATGTCCCTCTGGTTTCTCTTGTGAGTAAACTGAGTGGCAAAGCCTTTATCGGACACCCTTTGACAGTTGAGGTCTTGGATGATGGTCATTGTGAACAAGTTTTGAGTGGCATTAGTATTGGATGTGACCTAGAAGTTGGTGACATCTACTGTGAGGCCAAGCCAAACGTGGTAGCCGGAAGAACACGTTCCAAGAACTCATCACGTCTTTCATCTCGTAAATCTTCCAAGACCAAGAAATCTGGGCTGTTGAATAAAAAGATTCGGAAGCTATCCTCACTGACTGGTCACAGGCAGTCAGAAGAGCAGAGAAAACCAGTGGTAGAGAAGCTGAAAGGACCTGTTATAGCTTGTATTCCCCTGACAGTAGTATTTAGTAGGATAAATGAAGCAGTGAGTGGCCAGGCACGGTTAACACCCCATGCATTACCAACATCCAACCAATGA 2343 0.437 MGSSEESNINASVGGLVWVRRRNGSWWPGQILSLDEVSEDCLVSPKSGTPVKLLGRDDVSVDWYNLEKSKRIKAFRCGDYDKCIEKAKVSAASLNKKAVKYARREYAIIHALELESAILDKENSCSRLDRPGSEHGGSAGELPIISDSGDDNEDVTNDLTDSEVNSNSALELSQSAISFEEPNHNGSLKMQSTQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVSKRKVQGTGTTEIVQNGGASLNKTTAGNCLVNGTSVNGGKGYSSTLKRKRSQVPNVHEFLKRKNRRRPLTKVLESTAMLPVPVNCDQLPSSSSSPLNGITDGRISGLDSNDLNKGSPTANHNSDSIDAACENGASLIVHDQCNGASAFHIDDRVMENETSGIPGLVGNGSPDKLFDVPFVGVLGEEKNPPGSSPILVSCSSGKPQICASGQQSCHASQSDTVSLRNEGKNEYGCTISAAGDSIVGHSAGKDSSKWQSKGKRNSRHTSKSRKQVRKYMDISRESSAYLQGIGNSDGFCLNAGQKVDSNGMCAPNASHNRSSQIKCKPVSEGQSEGFGDMAKHIRGTVAEAKLLPDMPLTPQRSLPYRHSRFTVNSRYQMADFPGRNHCSDGSLYDVKVEVKSSYRPQHVPLVSLVSKLSGKAFIGHPLTVEVLDDGHCEQVLSGISIGCDLEVGDIYCEAKPNVVAGRTRSKNSSRLSSRKSSKTKKSGLLNKKIRKLSSLTGHRQSEEQRKPVVEKLKGPVIACIPLTVVFSRINEAVSGQARLTPHALPTSNQ* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1469 780 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 1 776 - -
Lja3g1469 780 ProSiteProfiles PWWP domain profile. 13 75 IPR000313 -
Lja3g1469 780 PANTHER T17B22.17 PROTEIN-RELATED 1 776 IPR044679 -
Lja3g1469 780 MobiDBLite consensus disorder prediction 125 211 - -
Lja3g1469 780 MobiDBLite consensus disorder prediction 196 211 - -
Lja3g1469 780 MobiDBLite consensus disorder prediction 331 350 - -
Lja3g1469 780 SUPERFAMILY Tudor/PWWP/MBT 12 107 - -
Lja3g1469 780 MobiDBLite consensus disorder prediction 159 195 - -
Lja3g1469 780 MobiDBLite consensus disorder prediction 471 501 - -
Lja3g1469 780 MobiDBLite consensus disorder prediction 693 714 - -
Lja3g1469 780 Gene3D - 4 112 - -
Lja3g1469 780 MobiDBLite consensus disorder prediction 699 714 - -
Lja3g1469 780 Pfam PWWP domain 15 106 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1469 Lja-Chr3 15566746 15571453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1469 - - gmx:100791879 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1469 3 15566746 15571453 Lja3g1469 3 15566746 15571453 ECH