Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1462 ATGCAGTCTAGGTTGGAGGAAGGGAAGGACCCTGGTGTGATAAGAACTAGTCCTTCTAGGCCATTCCCTGTGAGACTTCTGCAATTCTTCTTGCTATTTTTGGTTATTGGCTTGGGTGGTTTCTTTCTTAGCATGTACATGATTAGGCATTTCGGTATTCACAATGTGGCTCTGGTACAATCTACGTTCAGGCCTTGCGTCCAGCAGCCGGCGGCTATAGAAAGTTGGATTAGGCCTCCGTCGAGTTTGCTGCACACCATGAATGACATGGAGCTCTTTTGGCGGGCTTCTTTCGTTCCGAGGATCGAGAGTTATCCTTTTAAAAGAACTCCAAAGATTGCCTTCATGTTCTTGACCAAGGGACCCTTGCCTATGGCGCCGCTCTGGGAGAAGTTCTTTAAAGGGCACCAGAAGCTATATTCCATCTATATTCATTCACTGCCATCTTACAATGCTGATTTTCCACCATCATCAGTTTTTTATAAGAGAAACATCCCAAGCCAGGTTGCAGAGTGGGGAATGATGAGTATGTGTGATTCTGAAAGAAGACTTCTGGCGAATGCATTGCTTGATATTTCAAACGAATGGTTTATCCTCCTGTCTGAGTCATGCATTCCTCTCCAGAACTTCAGCATTATATACCGTTACATATCACGCTCAAGGTACAGCTTTATGGGTGCAGTTGATGAACCCGGTCCTTACGGGAGAGGACGTTACGATGAAAACATGGCACCTGAGATCAACATGAGCGATTGGCGAAAGGGGTCTCAGTGGTTCGAAATTAATCGAGAACTTGCTATTAGAATAGTTGAAGACAGCACTTACTATCCGAAGCTCAGAGATTTCTGCAGACCACACAAATGCTATGTTGATGAGCACTATTTCCAGACAATGTTAACCATTAACACTCCTCATCTTTTGGCAAATAGGAGCCTCACTTATGTGGACTGGTCTAGGGGTGGTGCCCACCCAGCTACCTTTGGGAAGGATGATATCAAAGAGGAGTTCTTCAAGAAAGTTTTGCAAGAGCAGACATGTCTTTATAATAACCAGCCATCTTCCCTTTGTTTCTTATTCGCGAGAAAGTTTGCACCGAATGCTTTGGGTCCTCTTTTAGATATAGCACCCAAAGTTCTAGGAATATAA 1146 0.4424 MQSRLEEGKDPGVIRTSPSRPFPVRLLQFFLLFLVIGLGGFFLSMYMIRHFGIHNVALVQSTFRPCVQQPAAIESWIRPPSSLLHTMNDMELFWRASFVPRIESYPFKRTPKIAFMFLTKGPLPMAPLWEKFFKGHQKLYSIYIHSLPSYNADFPPSSVFYKRNIPSQVAEWGMMSMCDSERRLLANALLDISNEWFILLSESCIPLQNFSIIYRYISRSRYSFMGAVDEPGPYGRGRYDENMAPEINMSDWRKGSQWFEINRELAIRIVEDSTYYPKLRDFCRPHKCYVDEHYFQTMLTINTPHLLANRSLTYVDWSRGGAHPATFGKDDIKEEFFKKVLQEQTCLYNNQPSSLCFLFARKFAPNALGPLLDIAPKVLGI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1462 381 PANTHER - 4 379 - -
Lja3g1462 381 Pfam Core-2/I-Branching enzyme 113 340 IPR003406 GO:0016020|GO:0016757
Lja3g1462 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 4 379 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1462 Lja-Chr3 15457402 15461021 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1462 - - gmx:100793448 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1462 3 15457402 15461021 Lja3g1462 3 15457402 15461021 ECH